Collimonas pratensis: CPter91_2537
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Entry
CPter91_2537 CDS
T04306
Name
(GenBank) helicase conserved C-terminal domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpra03009
]
CPter91_2537
Enzymes [BR:
cpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CPter91_2537
Ribosome biogenesis [BR:
cpra03009
]
Prokaryotic type
rRNA helicases
CPter91_2537
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
AAA_22
ERCC3_RAD25_C
PAS_12
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AMP04891
UniProt:
A0A127Q4F0
LinkDB
All DBs
Position
complement(2569618..2570997)
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AA seq
459 aa
AA seq
DB search
MKTTSFSNLPLAPALLSNLDSLGYHEMTTIQAQSLPVILERRDLIAQAKTGSGKTAAFGI
GILHKLNPSYFAIQALVLCPTRELADQVAKELRRLARFADNVKILTLCGGTPMGPQIGSL
EHGAHIIVGTPGRIRDHIGRGSINLGTVQTLVLDEADRMVDMGFYEEISGIVSACPARRQ
TLLFSATYPDDIRKASAEFLRDPAEVKVEAQHDEGRIEQRFYEVSYEGRNAAVAQLLNHY
KPVSTIAFCNTKIHCRELADELRAQGFSALALYGELEQRERDEILVRFANQSCSVLVATD
VAARGLDIQTLGAVINVDVSKDTEVHIHRIGRTGRGQDRGLALSLCAQNEKKWVKLIEDY
QQGPVAWFDLAELEPAYGEPLTAPMLTLCIMGGKKDKLRPGDLLGALTGDVGLSKEQVGK
ISVFEFITYVALDRRIAKQAFGKLSNGNIKGKNFKMRFI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccacctcattctccaatctcccgctggcgccggcgctactcagcaacctcgat
agcctgggctaccacgagatgaccacgatccaggcgcagagcctgccggtgatcctggag
cggcgcgacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttcggcatc
ggcatcctgcacaagctcaatcccagctattttgcgatccaggcgctggtgctgtgcccg
acgcgcgaactggcggaccaggtggcgaaagaactgcggcggctggcgcgcttcgccgac
aacgtcaagatcctgaccttgtgcggcggcacgccgatgggaccgcagatcggttcgctg
gagcacggcgcacacatcatcgtcggcaccccgggccgcatccgcgaccacatcggccgc
ggcagcatcaatctcggcaccgtgcagacgctggtgctggacgaagccgaccgcatggtc
gacatgggcttctacgaagaaatctccggcatcgtcagcgcctgcccggcacgccgccag
actctgctgttttccgccacctatccggacgatatccgcaaggccagcgccgagttcctg
cgcgacccggcggaagtcaaggtcgaagcccagcatgacgaaggacgcatcgaacagcgt
ttctacgaagtcagttacgaaggccgcaacgccgccgtggcgcaattgctgaaccattac
aagccggtctcgaccatcgccttctgcaacaccaagatccattgccgcgagctggccgac
gaactgcgcgcacagggtttcagtgcgctggcgctgtatggcgaactggaacagcgcgag
cgcgacgagatcctggtgcgcttcgccaaccaaagctgctcggtactggtagcgaccgac
gtcgctgcccgcggcctggatatccagaccctcggcgcagtcatcaacgtcgacgtctcg
aaagataccgaagtccatatccatcgcatcggccgtaccggccgcggccaggatcgcgga
ctggcgctgagcttatgtgcgcagaacgaaaagaaatgggtcaagctgatcgaggactac
cagcagggaccagtcgcctggttcgacctggccgagctggaaccggcctatggcgagccg
ctgaccgcgccgatgctgaccttgtgcatcatgggcggcaagaaagacaagctgcgcccg
ggcgatctgctgggtgccctgaccggcgacgtcggcctgagcaaggaacaggtcggcaag
atcagcgtctttgaattcatcacctatgtcgcgctggaccgccgcatcgccaagcaggca
ttcggcaagctaagcaacggcaatatcaaaggcaagaatttcaagatgcgtttcatctga
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