Collimonas pratensis: CPter91_2605
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Entry
CPter91_2605 CDS
T04306
Name
(GenBank) pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cpra
Collimonas pratensis
Pathway
cpra00300
Lysine biosynthesis
cpra00470
D-Amino acid metabolism
cpra01100
Metabolic pathways
cpra01110
Biosynthesis of secondary metabolites
cpra01120
Microbial metabolism in diverse environments
cpra01230
Biosynthesis of amino acids
Module
cpra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CPter91_2605
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPter91_2605
Enzymes [BR:
cpra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CPter91_2605
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMP04957
UniProt:
A0A127Q4J3
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All DBs
Position
complement(2648929..2650050)
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AA seq
373 aa
AA seq
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MLDLKTPCYVFDPSAVLARHEDLRQRLGTPLIVSLKANPNLDLLIRCGHAFVDGVELASQ
GELDLAVGRITAPKYVNNPSMDENFMRAALASRCIFIIDSLEQAQRLVRVIGKQAAPQAV
LRLNAGELAAGRKDLADHFGMSRQDALQSATELTRADVQIIGLHTFAGSYNFRIDGSGAD
SADLAFALAAFAPEVARVTGTPVSFLNFGGGFAENFDKQAATFDAYRQRIAPLHEKFKIV
HESGRGIFAGAGSFVTRVRSVKTLGERCIAVCDGGLSHNFLLAKTESVLKKYAEPRLLRR
QPEAAAVAAGSLPIQYVGSTCSRADVIGWHQAPTAPPAAGDLVIFENCGAYNQTYSVSGF
LSQQAARSYIRQS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgatctgaaaacaccctgctacgtattcgatccgagcgccgtgctggcgcgccat
gaggatttacgccagcggctgggcacgcccctgatcgtctcgctcaaggccaatcccaac
ctggatctgctgatccgttgcggccatgccttcgtcgacggcgtcgaactggccagccag
ggcgagctggacctggcggtgggccggatcaccgcgcccaaatatgtcaacaatccttcg
atggatgaaaatttcatgcgcgccgccctcgcctcgcgttgcattttcatcatcgacagc
cttgagcaggcgcagcgactggtccgtgtgatcggcaaacaggccgcgccgcaagccgtg
ctacgcctgaatgctggtgaactcgccgctggccgcaaggacctggccgaccatttcggc
atgagccggcaggatgccctgcaaagcgcaaccgagctgacgcgcgccgatgtccagatc
atcggcctacatactttcgccggctcctacaatttccgcatcgacggcagcggcgcagac
tccgccgacctggctttcgcgctggcggcgtttgcgccggaagtagcgcgcgtgaccggc
acgccggtgagtttcctcaactttggcggcggcttcgcggaaaatttcgacaaacaggca
gcgacctttgacgcctatcgccagcgcatcgcgccgctgcacgaaaaattcaagattgtt
cacgaatccggccgcggcatcttcgccggtgccggcagcttcgtcacccgggtgcgttcg
gtgaaaaccctgggcgaacgctgtatcgccgtgtgcgacggcggcctcagccacaatttc
ctgctggcgaagaccgaatccgtcctgaaaaaatatgcggagccgcgcctgctcaggcgt
cagcctgaagccgctgccgttgctgctggcagcttgccgatccaatacgtcggcagcacc
tgcagccgggccgatgtcatcggctggcaccaggcgcccacggcgccgcccgccgccggc
gacctggtgattttcgagaactgcggcgcctataaccagacctatagcgtcagcggcttc
ctctcgcagcaggcggcgcgctcctatatccgtcaatcctga
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