Collimonas pratensis: CPter91_3019
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Entry
CPter91_3019 CDS
T04306
Name
(GenBank) RHS repeat-associated core domain protein
Organism
cpra
Collimonas pratensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Kelch_4
Kelch_6
DUF6531
Kelch_1
Kelch_2
Kelch_KLHDC2_KLHL20_DRC7
Big_5
CarboxypepD_reg
Glyoxal_oxid_N
CarbopepD_reg_2
Kelch_3
fvmX1
Motif
Other DBs
NCBI-ProteinID:
AMP05360
UniProt:
A0A127Q5J6
LinkDB
All DBs
Position
complement(3102301..3107823)
Genome browser
AA seq
1840 aa
AA seq
DB search
MKNSLCSTLKPEKLTHRSRRLAGALLLAMAFAGAAPMTLATTALPVVAASSSSVDALSRL
LVAQPALLVGQSATQLADGQWLVIGGASAGVAGNQAWRIGADGQRTALPSTLHLSRSRHS
ATLLPDGKVLVLGGVDAHGGVLADAELFDPATGAFTDLGSLGLAGRSAHSATVLMDGRVL
LAGGVDASGNPIRDVDIYDPVSRRIERLTAKLGSDRIAPTTLLLPDNRVLIWSGSTASGQ
AQATADVYSSDSGQFSTLPMDAVQQLANGLARSAAPGVLGQLPSSGATNVPVAQRLVLRF
SQKMAIGSFNNATVTLMGPNGAVGVLPVAVDNGVLLFATPTQELLPASSYTLFVQGATDQ
FGQPLPLTAVGFKTVALNTARTATAIAQATLAQGALASGSGKTVSGNTTGPASKDAAPVP
APKAPTNQMVTSIETAEDGELWVPGVGDHYGQWRRGDRNVSLQHLPKNLALRRVLYGYPE
LMSLTPADVAMKRIPNVEPLATGVTSVSGQVLRLNGVPLVNATLSMGDQQVKTDENGEFT
LSPVPSGRQTLVINGESATIGEHHYGRYEYGFNVEAGKPNLLPFVIWMSRLNPQTVKIAS
PTESDTVLSNPQIPGLELRIPAGMVIRDANGKIVTEISMTAVPVNQPPFPLPHINVPVYF
TVQPGGSHLEGINAASAKGAQIVYPNYPHAKPGTRMTFWDYDAAKRGWFEYGQGTVTADG
KQVMPDANVRIYEFTGAMITTMAPSTNAPTTGPKDCGCKTADPVDTYSGLFINQETDLTI
SDIVPIRVSRSYRQADDASRAFGIGTNLSYDMFLTGGYDTSKDQILPYASLIKPDGGQIN
FVRVSGGTGYTNAVFQSTSDPTTAYYGAIVKWDTTYPGADWSVTLKTGDVYYFPGVGDGS
GTARQGAMLGMKDRFGNLTQLVRTNANLTQIISPSGRNVYLTYDGSNRITQIQDDLARTV
GYAYDASGRLMTVTDPMGKTTQYTYGTQTLDPAHSVGGVKSSTNMLTVTDKNGNVKTSNV
FDSNGRLSKQTYADGRFFQFGYVLQSSQTGTGTSTAGFDTVLQTDATDERGTVTRYSFDT
NGAPTSVISAFGTTLQQTASNNWNSTTHLLDSTTDAMGRVTAYQYDRLGNKTQITQLAGT
SNAVTTNVAYDLTYSLPTSITDPNGNSVTLTYNNLGNLTQATDALGHAVVMTYDSKGRRT
SITDALGHATSFAYAGADLQAVTDALGRTVSSYTDIVGRPTSVTDMLNNRTYVAYDNLDR
ATAITNAKGGVAQIGYDANGNVLSQIDENNNATGFTYDSRDRMSSMTDALAHKATASYEP
GGKVSQSVDNKGQITNRTYDALGRLTSISYGANAGGTSSASNTTFTWDNGNRLTQIVDSV
SGTITRNYDLLDRTLSETTPQGTVTRTFDAAGRRLTLTVAGQPTISYSYDVVNRLTQIQQ
AAGSSNGNVAQTTGYTYDNANRLTQRVYPNGIHASYSYDNGNQITGIAYAKADGSAIGDL
SYTYDTVGRRTGVGGSLAQINPGAAVSTTSFNAANQLTTFGTQTLTYDANGNLTSDGTNT
YIWDERNQLQSIAGSNMASFQYDAMGRRVGKTIGTTSTGYLYDGINFVQEKSGTGSGAGV
TANLVTGPGVDNVLVRQTNAGNQTMLTDALGSIIMATDATQATVSSYSYDAYGNTIQVGT
NDNSQQYTGRENDATGLYYYRARYYSPAMGRFISQDPIGWASGQTNGFSYVNGNPLSEVD
PYGQQMVESDSSGFKADIHEAAGNGNEVVQSEAQANPALALCHQWIETCPGDVIISKPPE
LECDPDPHMCTKENQSGKRICRPKTPNFKYIPAPFKFFNK
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattcgctatgttcgaccctgaaacctgagaaactgacgcatcgttccaggcgg
cttgccggggcactgctgctggccatggccttcgccggtgcggcgccgatgaccttggcg
acaacggcattgcctgtcgttgctgccagcagttccagtgtcgatgcgctgtcgcggttg
ctggtggcgcagccggcgctgctagtcggccaaagcgcgacgcagttggcggacggtcaa
tggcttgttatcggcggcgccagcgctggcgtggcggggaaccaggcctggcgcattggc
gcagatggtcaacgtacggcattgccttccacgttgcacctgtcgcgaagccgtcacagc
gccacgctgcttccggatggcaaagtgctggtgctgggtggtgtggacgcccatggcggg
gtattggcggatgccgaactgttcgatcctgcgacaggcgccttcacggatctgggcagc
ctgggactggccggccgcagcgcccatagcgcgactgtattgatggatggtcgggtattg
ctggcaggcggtgttgatgccagtggcaatccgattcgtgacgtggatatctacgacccg
gtttcgcgcaggatagaacgcctcacagccaagctgggcagcgatcgtatcgcaccaacg
acgttgctgttgccagacaatcgcgtgctgatctggtctggcagcaccgcaagtggacaa
gcgcaggcgacagccgatgtgtattcgtccgatagcggccaattctcgaccctgccgatg
gatgccgtccagcagctggccaacggcttggcccgtagtgcggcgccaggcgtacttggt
caattaccgtcaagtggcgccaccaatgtgccggtggcgcaacggctggtgctgcgtttc
tctcagaagatggcgattggttcatttaacaacgcgacagtcacgctgatgggaccgaat
ggcgcggtgggcgtactgccggttgcggtagataacggtgttctgctgtttgcaaccccc
acgcaagaattgctgcctgccagttcttataccttgttcgtacaaggcgccacggaccaa
tttgggcagccattgccgctgacggcggttggcttcaagacggtggcattgaatacggca
aggacggctaccgcgatcgctcaggcgactctggcgcaaggcgccttagcctcaggtagt
ggcaagacggtatctggcaacaccactggtcctgccagcaaagatgcggcgccggtaccg
gcgcctaaggcacccaccaaccagatggtcacctcgatagagacggcagaagacggggaa
ttgtgggtgcctggggtaggggatcattacggccaatggcgccgtggcgaccgtaatgtc
tccttgcagcatttgccgaagaatctggcgctgcgccgtgtactgtacggctatccggaa
ctgatgtcactgacgccggccgacgttgccatgaagcgcatcccgaacgtggagccgtta
gcgacgggagtgacctcggtatccggccaagtgttgcgcttgaatggcgtgccgctggtc
aatgccacgctgtcgatgggcgatcagcaggtgaagactgacgagaatggggaatttacg
ctctcaccagtaccatctggccgccagaccctggtcatcaacggcgagagcgccactatt
ggcgagcatcattacggccgttatgaatatggctttaatgtagaagccggcaagcccaac
ttgctgccgttcgtgatctggatgtcgcgactgaacccgcaaacggtgaagatcgcctcg
ccgacagaaagcgatactgtattgagcaatccgcagattccagggctggagctgcgcatt
cctgcaggcatggtcattcgcgatgccaacggcaagattgtgactgaaatcagtatgact
gcagtgccggtcaaccagccgccgtttccgctgccgcatattaatgttccggtgtatttt
acggtgcagccaggcggctcgcatctggaaggtattaacgccgcaagtgccaagggcgcg
caaattgtctatccgaactatccgcacgccaaacctggcacacgcatgacgttctgggat
tatgacgctgccaagcgtggctggttcgaatatggtcagggaacagtgactgctgacggc
aagcaggtgatgccggatgcgaatgtgcgtatttatgaatttacgggggcgatgattacg
acgatggcgccgtcgaccaatgcacctactaccggacccaaagattgcggctgcaagacc
gccgatccagtggacacctattctggactcttcattaaccaggaaaccgatctgacgatc
tccgatatcgtgccgatccgggtcagccgcagctaccgccaggcagacgatgccagccgc
gcttttggtattggtacgaacctgtcctacgacatgtttctgaccggtggctacgacacc
agtaaagaccagatcctgccgtatgcatcactgatcaagccggatggcggccagattaat
ttcgtacgtgtctcaggcggcaccggctataccaatgccgtgtttcagagtacttcggat
ccgaccacggcatattacggcgccattgtgaaatgggatacgacctatcctggtgctgat
tggagcgtgacgctgaagaccggtgatgtttattactttccgggtgttggcgatggcagt
ggtacagcacggcagggcgccatgctgggtatgaaggaccggttcggcaatttgacgcag
ctggtgcgcacgaatgcaaatctgacccagatcatatcgccaagcggtcggaatgtgtat
ctaacctatgacggaagcaatcgaattacgcaaatccaggatgatctggcgcgcacggtg
ggttatgcctacgatgccagcggacgtttgatgacggtgaccgatccgatgggcaagacg
acccaatatacctacggtacgcagacacttgatcctgcgcattccgtgggcggtgtcaag
tccagcaccaacatgctgacggtgacggacaagaatggcaacgtcaagaccagcaacgtc
tttgacagcaatgggcggttgagcaagcagacatatgcggacgggcgtttcttccagttc
ggttatgtattgcaatcgtcacaaacgggcacaggaaccagtactgccggttttgacacg
gtgctacaaaccgacgccactgatgaacgcggtacggtaacgcgatatagcttcgacacg
aatggagcgccgaccagcgtcatcagcgcgtttggtacgacactgcaacaaacggcgagc
aataactggaacagcaccacacatctgctcgacagcacgaccgacgccatgggccgcgtg
acggcgtatcagtacgatcgcctgggcaacaagacgcagattacgcaattggctggtacc
agcaatgcggttactaccaatgtcgcctatgatctgacctacagcctgcccaccagtatt
actgatccgaacggtaatagtgtgacgctgacctataacaatctggggaatttgactcag
gcgaccgacgccctggggcatgcggtggtgatgacgtatgacagcaaagggcggcgcacc
agcatcaccgatgcactcggccacgccaccagctttgcttacgcgggcgccgatttgcaa
gcggtgaccgacgccttgggacgcacggtgagttcttataccgatatcgttggtcgcccg
accagcgtgacggacatgctgaacaaccgtacctatgttgcctatgacaatttggatcgt
gctacggcgatcaccaatgccaaaggtggtgtcgcccagataggctatgacgctaatggc
aatgtattgagccagatcgacgagaacaacaatgccaccggattcacctatgacagccgg
gaccggatgagcagcatgaccgatgcgctggcgcacaaggcgacggcatcgtacgagcct
ggcggcaaggtgagccagagcgtcgataacaagggacaaatcaccaatcgtacctacgat
gcattgggacggctcactagtatcagctacggcgccaatgccggcggcacgagcagcgcc
agcaatactacattcacatgggacaatggcaatcgcctgacgcagatcgtagattctgtt
tccggcacgatcacgcgcaattatgatctgctggacagaacattgagcgaaaccacgccg
caaggtacggtcacccgtacgtttgatgcggcaggacgccgtttgacgttgacggtcgcc
ggccagccgacgattagttatagctacgacgtggtcaaccgtttgacgcaaatccagcag
gcagccggcagcagcaatggcaatgtggcgcaaaccacaggttatacctacgacaatgcc
aaccgcctgacgcaacgcgtctatcccaatggtatccatgccagctacagctatgacaat
ggcaaccagattactggaatcgcttatgccaaggcggatggttcagccattggagatcta
agctatacctacgacacagtggggcgccgtaccggcgttggcggatcgctggcgcaaatc
aatccgggtgcagcggtgagtacgaccagttttaatgcagcgaatcaattgactacgttt
ggtacgcagacgttgacctacgatgccaatggcaatttgaccagcgacggcaccaatacc
tacatctgggatgagagaaaccagctgcaaagcatcgctggcagcaacatggccagcttc
cagtacgatgcgatgggacgtcgggtcggcaagacgattggcacgacttcgaccggctat
ctgtatgacgggatcaactttgtgcaggagaagagcggcaccggcagcggcgcaggtgtg
acggcgaatctggtgacaggacctggcgttgataatgtgctggtacggcagaccaatgcg
ggcaaccagacgatgctgacggatgctttgggtagcatcattatggcgactgatgcgacg
caggcgacggtgagcagctacagctacgatgcctatggcaatacgatccaggtagggact
aatgataatagccagcagtacactggtcgggagaacgatgcaacaggactgtactattac
cgggcacggtactactcgccggcaatgggccggtttatttcgcaagatccgattggatgg
gcatccggacaaaccaatggtttcagctatgtcaatgggaatccattaagtgaagtggat
ccctacggtcaacaaatggtggaaagtgattcaagcggatttaaagctgacatacatgag
gcagctggaaatgggaatgaagtcgtgcaatcagaggcgcaggcaaacccggcgttggct
ttatgtcaccaatggatagagacttgtccaggcgatgtgattatttctaaacctccagaa
ttagagtgcgatccagatccacatatgtgtacaaaagagaatcaaagtgggaaacgcatt
tgccgccctaaaacacctaattttaaatatattcctgcaccatttaaattttttaataaa
tga
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