Collimonas pratensis: CPter91_3158
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Entry
CPter91_3158 CDS
T04306
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_3158 (radA)
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPter91_3158 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA_22
GvpD_P-loop
Lon_C
AAA_24
ChlI
AAA_16
RecA
DUF7125
AAA_14
SLFN-g3_helicase
Rad51
AAA
nSTAND3
DUF7129
NTPase_1
ATPase_2
AAA_5
ABC_tran
CobU
MCM
AAA_29
PAXNEB
NB-ARC
DUF7130
Motif
Other DBs
NCBI-ProteinID:
AMP05493
UniProt:
A0A127Q638
LinkDB
All DBs
Position
complement(3256172..3257542)
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AA seq
456 aa
AA seq
DB search
MAKAKTNYTCTECGGIANKWTGQCPSCGQWNTLVETIVEAVGNRFSNQHQGLAQTAPVMT
LADIEAIDVPRFGTGIEEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALANLSKIKKV
LYVSGEESGAQIALRAKRLAVDAGDLRLQAEIQLEKILNTLVEHKPEVAVIDSIQTVYSD
ALSSAPGSVAQVRECAAQLTRVAKQSGITIIMVGHVTKEGALAGPRVLEHIVDTVLYFEG
DTHSSFRLVRAFKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDSQVPGSCVMVTQE
GTRPLLVEIQALVDASHVPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAVGG
VKITEPAADLAVLLAINSSMRNRPLPRGLVVFGEVGLAGEIRPAPRGQERLREAAKLGFS
IAMIPKANMPKQEIEGLKVIGVERIDDALSKIRDAE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagctaaaaccaattacacctgtaccgaatgcggcggcatcgccaataaatgg
accggccagtgtccctcgtgcgggcagtggaatacgctggtggaaaccatcgtggaagcg
gtcggcaaccgtttttccaaccagcaccagggcttggcgcagacggcgccggtgatgacc
ctggccgatatcgaagcgatcgatgtgccgcgcttcggcaccggcatcgaagaattcgac
cgcgtgctgggcggcggcctggtggctggcggcgtggtgctgatcggcggcgatccgggc
atcggcaagtcgaccttgctgctgcaggcgctggcgaatctttccaagatcaagaaagtg
ctgtacgtcagcggcgaagagtcgggtgcgcagattgccttgcgcgccaagcgcctggcg
gtggatgccggcgacctgcgcctgcaggcggaaatccagctggaaaaaatcctcaacacc
ctggtggagcacaagccggaagtggcggtgatcgattcgatccagacagtctattcggat
gcgctcagctctgctcccggttcggtggcgcaggtgcgtgaatgcgcggcgcagctgacg
cgggtcgccaagcagtccggcatcaccatcatcatggtcggccacgtcaccaaggaaggt
gcgctggcggggccgcgcgtgctggagcatatcgtcgataccgtgctgtacttcgaaggc
gacacccattccagtttccgcctggtgcgggcgttcaagaaccgcttcggcgccgtcaac
gaactcggcgtgttcgccatgaccgaaaaaggtctgaagggcgtgtcgaacccgtcggcg
ctgttcctttcgcagcacgacagccaggtgccgggttcctgcgtgatggtgacacaggaa
ggcacgcggcccttgctggtggaaatccaggccctggtcgacgcctcgcacgtgccgaac
gcgcggcggctatcggtggggctggaacagaaccgcctggcgatgctgctggcggtgctg
caccggcatgccggcatcgcggcgttcgaccaggacgtcttcatcaacgccgtcggcggc
gtcaagatcaccgagccggccgccgatctggcagtgctgctggcgatcaattcctccatg
cgtaaccggccgctgccgcgcgggctggtggtgttcggcgaagtcggcctggccggcgag
atccggccggcgccgcgcggccaggaacgcctgcgcgaagccgccaagctgggtttttcg
attgccatgattcccaaggcgaacatgccgaaacaagagatcgaaggcttgaaagtgatc
ggcgtagaacgcatcgatgacgccctgagcaagatacgtgacgccgagtaa
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