Collimonas pratensis: CPter91_3320
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Entry
CPter91_3320 CDS
T04306
Name
(GenBank) periplasmic binding domain protein
KO
K10439
ribose transport system substrate-binding protein
Organism
cpra
Collimonas pratensis
Pathway
cpra02010
ABC transporters
cpra02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPter91_3320
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CPter91_3320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_3320
Transporters [BR:
cpra02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CPter91_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AMP05647
UniProt:
A0A127QX00
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All DBs
Position
3413412..3414518
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AA seq
368 aa
AA seq
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MKFTNFNFVTVALVFGFISSAFAQEDPTLFLNRANAKIAKAMAFKNSWDGPTSGPKISAQ
KKLIVVIASNLKNNSVLRVSKGVQEAAAVAGWEVFVIDCWGVDNKHAEAFSRALALKPSG
IVLAGIDANEQPKEMNAANAQNVPVVGWHASTRVGPSDGLFSNVTADPKEEALIASLLGV
VDSNGKAGVVVFTDPASLYSQAKSNEVVAVIKQCRTCSLLSVEALPIATSPDKLPALLAT
LQQRFGKKWTHIIGVNDSYLDLLATPASMSLLANNKIQALSAGEGSETAYQRIRSKNLQI
ATVPEPFGQQGWQIIDELNRAFAGEKASAYTTPAYLVTEQNIAFHGGDKNTFEPNNGYRA
EYKKIWGK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaaattttaattttgtaacggtagcacttgtcttcggctttatcagttca
gcattcgcacaggaagatccgaccttgttcttgaatcgggccaacgccaagatcgccaag
gcgatggctttcaagaacagctgggacggccccaccagcggccctaaaatctcggcgcaa
aaaaaactcatcgtcgtcatcgcttccaatctcaaaaacaatagtgtcctgcgggtttcc
aagggcgtgcaggaagccgccgcggtcgccggctgggaagtgttcgtaatcgattgctgg
ggcgtggacaacaagcacgcagaagccttcagccgcgcgctggcattgaagccaagcggc
attgtgctagccggtatcgacgccaacgaacagccgaaggaaatgaacgctgccaatgcc
cagaatgtcccggtagtcggctggcatgcatcgacccgggtcggtccgagcgacggtctg
ttttccaacgtcactgctgatccgaaagaagaagccctgatcgccagcctgctgggcgtg
gtcgattccaacggcaaggccggcgtggtggtgttcaccgatccggccagcctgtattcg
caagcgaagtcgaacgaagtggtggccgtgatcaagcagtgccgaacttgcagcctgctc
agcgtcgaggccttgcctatcgccacctcgcctgacaagctgccagccttgctggcgacg
ctgcagcagcgcttcggcaagaaatggacgcatatcatcggcgtcaacgacagctatctc
gacctgctggcgacgccggcctcgatgagcctgctcgccaacaacaagatccaggcacta
tcggccggcgaaggttctgaaacggcctatcagcggattcgcagcaagaacctgcagatc
gccaccgtgccggaacctttcggccagcaagggtggcagatcatcgacgagctcaatcgc
gcatttgccggcgaaaaagccagcgcctacaccacgccggcctatctggtgacggagcag
aacatcgcctttcacggtggcgacaagaatacctttgagccgaataacggttaccgcgcc
gagtacaaaaaaatctggggcaaatga
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