Collimonas pratensis: CPter91_3462
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Entry
CPter91_3462 CDS
T04306
Name
(GenBank) hep_Hag family protein
KO
K21449
trimeric autotransporter adhesin
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_3462
Transporters [BR:
cpra02000
]
Other transporters
Pores ion channels [TC:
1
]
CPter91_3462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
Motif
Other DBs
NCBI-ProteinID:
AMP05788
UniProt:
A0A127Q6V0
LinkDB
All DBs
Position
complement(3558018..3563093)
Genome browser
AA seq
1691 aa
AA seq
DB search
MGANNTSNGQGAVAIGNSNTATGQGSMALGNASSASAAGGVALGDTAVANNTNDVALGSH
STTAAPHTGTTAQFGGTAAGVEAAASTNGVVSVGAAGTERQIQNVAAGVISATSTDAING
SQLNSVVTGVNNLGTTTAGTLGGGASYDPTTGNVTGFSQPINTVSNTGAVTGPTAQTTVA
GALTALNTNIDNTANIAVKYDAAGGSKITLGATGGAGAGAPVTITNLAPAALNATSTDAV
NGSQLFGTNQNVANITNGKAGPFVSDNSVTAVQPVSSGANASAGGFGATATGAASTVLGN
QSTDNGNANATVLGQGASIAAGTAGSNVALGQGSTVAAAAVPTAGATIGGTAYTFAGGAP
TGVVSVGSAGSARQVTNVAAGQLSGASTDAVNGSQLFATNQQVTSNTTAINNISNGGGIK
YFHANSTLADSTATGTDSVAVGPAAVATGAGSFAAGNGATANNANDVALGAGSTTAVAVG
TPSTVINGASFNFAGTAPTSTVSVGSFGNERTITNVAAGRLSGTSTDAVNGSQLFATNTA
VTNLGTTVTNINNGGGIKYFHANSILADSQATGTDSVASGPLAVASGASASAYGNGASAA
GVNSVAVGNQATASNIDATALGFNANASGRNSIALGSNAVAVGNVSTNGGPANGFATAIG
QSASATGSSSTAIGGNSLSSGTKSLALGDTAASSATRSVAIGSNANATADFALAIGNLAK
AINAGDVALGSGSATAAAVGTPSAMINGITYNFAGTTPVSTVSVGSAGNERTITNVAAGR
LSITSTDAVNGSQLNATNTAVTAIGNTLNNISNGGGIKYFHTNSTLADSNAAGTDSIAVG
PVANAYGNDSIAQGLNAVAGVNGTPATANDIALGNGAQATGGNSIAQGTGAIANSAGAIA
IGQTATATGGKAVSIGAGNTASGDGAVAIGDPNNATGTGAVAMGANNTSNGQGTVALGNA
NTATGQGSVALGNSSQANNAGSIALGDAATVSAAATQGIAIGSGASSNNPGAVALGAGST
TAAAIATTGVTINGTAYNFAGTTPASTVSVGAFGAERTITNVAAGQISAISTDAINGSQL
FATNTAIDTLGTTVTNITNGKAGPFVSDNSITAVQPVSSGANASAGGFGATATGAASTVL
GNQATDNGNADATVLGQGASIAVGTSGSNVALGQGSTVTSAAIATTGATIGGTAYIFAGG
APIGVVSVGSVGGERQITNVAAGQLSASSTDAVNGSQLYATNQQVTVNTTNIAGNTAAIS
NITAGKAGPFVSDSSVTATQPVSSGANASAGGFGAVASATNSTALGNGAQATAANSTAIG
QGATASTANSVALGNASTTGAAVATTGTTISGNSYNFAGAAPVGVVSVGSAGSERQVTNV
AAGQLTASSTDAVNGSQLFATNTAINNLTSVVALGQTKYYSVNSTGGSNEHNEGATGQDA
IASGKNAAATSMNAVAIGSGASATASGGVALGGGATADRAGMNGGKEQFSNTVVSSTQGA
VSVGSVGNERQITNVAGGTQATDAVNVRQLQAVQSGGVRYDTNPDGSTNYSSVTMGNGSS
AGPVTIHNVAAGTAPTDAVNVQQFNSGLGAAVQQANQYTDSRVQALQNSVDSNRHDADGG
SAAAMAVGGLPQPSAPGKSMVAIAGSTFQGQTGLALGISTISENGRWVYKAAATSSSRGQ
TGGVVSAGFQW
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgccaacaatacttccaacggtcaaggtgccgtcgcgattggcaattccaacacg
gccaccggccaaggatctatggcgctggggaatgccagtagtgcgtctgcggcgggcggg
gtagcgttgggtgatacggcggtggcgaacaataccaatgatgtggcgctgggttcgcat
tcgactacagcggcgccgcacacaggcaccacggcgcaatttggcggcaccgctgccggc
gtggaagctgcggcctcgaccaacggtgtggtgtcggtgggtgcagcgggtaccgaacgc
cagatccagaacgtggcggcaggtgtaatttcggcgactagcaccgatgccatcaacggt
tcgcagctgaattcggttgttactggcgtcaataacctgggcacgacaacagctggaaca
ctgggcggtggcgccagttatgatccgactactggcaatgtcaccggtttcagccagcca
atcaatacagtgagcaacacaggtgcagtaacgggtcctactgcgcaaaccacagttgct
ggtgcattaacggcgctgaatacgaatatcgataacacggccaatatcgcggtcaagtac
gacgcggctggcggcagcaagatcacccttggtgcgaccggcggcgccggtgccggcgcg
ccggtaacgatcaccaacctggcgccggcggccttgaacgcgaccagtacggatgcagtg
aatggttcgcagctgttcggcaccaaccagaatgtggccaacatcaccaatggcaaggca
ggtcctttcgtctcggacaatagtgtgacggcagtgcagccggtatcgagcggcgccaat
gctagcgccggcggttttggcgccacggcaacgggtgcggcgtccacggtgctgggtaac
cagtccaccgacaacggcaacgctaatgcaacggtattaggtcagggtgccagcattgcg
gctggcactgccggaagcaatgtcgcgctgggccaaggcagcaccgtggcggcggcggcg
gtgccgaccgccggtgcaacgattggcggcactgcttatacgtttgccggcggtgcgcca
accggtgtcgtcagcgtgggcagtgcgggttcggcacgccaggtcaccaacgtggcggcc
ggtcaattgagcggtgccagcacggatgcagtcaacggctcgcagctgtttgcgaccaac
cagcaggtgactagcaataccactgcaatcaacaacatcagcaacggcggtggtatcaag
tacttccatgccaattcgacactggccgattcgacagcgaccggtaccgattcagtggca
gtcggtccggctgcggtcgcaaccggggccggcagctttgccgcaggcaatggcgcaact
gcgaacaatgccaatgatgtggcattaggtgcaggttcaactaccgccgtggcggtggga
acacccagcacggtgatcaacggtgctagtttcaacttcgcgggaacagcacctacttcg
acggtcagcgtaggtagtttcggcaatgagcgaaccatcaccaatgtggcggcgggccgt
ctcagcggcaccagcacggatgcggtgaacggcagccagttgtttgccaccaacacggca
gtgaccaatcttggcacgacagtcacgaacattaacaacggtggtggcattaagtatttc
catgccaattcgatattggcggatagccaggcgactggcacggattcggtggcttcaggg
cctctggccgtggcctccggggccagcgcatcggcctatggcaacggtgcaagcgcggca
ggggtgaactcggtggcggttggcaatcaggcaacagccagcaatatcgatgcgacagcg
ctagggtttaacgccaatgcaagcggtaggaattcgattgccttgggttctaatgcggtg
gcagtcggaaatgtgagtaccaatggcggtccagcgaatggatttgcaactgcgatcggc
cagagtgctagcgcaactggcagttcctctaccgcaattggaggaaattccctgtcttcg
ggaacgaagtcgctggcgcttggagacacggccgcctcgtcggcaacaaggtctgttgcg
ataggatcaaatgcgaatgcaaccgcagactttgcattagccattgggaacctagcgaag
gctataaacgctggcgacgtggctctaggttcgggatcagcgacggcggcggcggttggt
acgccgagcgctatgattaacggcattacttacaattttgctggcaccacgccggtgtcg
acggtcagcgtaggcagtgccggtaatgaacgtacgatcaccaatgtggcagcgggccgt
cttagcatcactagtactgatgctgtaaacggttcgcagttgaacgcaaccaatacggct
gtaacggccattggcaacactctcaacaatatcagcaacggtggcggcatcaagtacttt
cataccaattcgacgctggccgacagcaacgcggcgggaactgacagcattgccgtcggt
ccggtcgccaatgcctacggcaacgactcgatagcccagggtcttaatgcagtggccggc
gtcaacggcaccccggcgactgccaacgatattgcactaggcaatggcgcgcaagcgacc
ggcggtaattcgattgcgcaagggaccggggcgatagccaattccgccggcgccatcgcc
atcggccagacagcaacggcaactggtggcaaggcggtatctataggcgcgggtaatact
gccagcggcgacggcgcagtagcgatcggcgatccgaacaacgccactggcacgggcgcc
gtggcgatgggcgccaacaatacttccaacggccaaggcaccgtggcgctgggaaatgcc
aatacggccaccggccaaggttcggtagcactgggtaactcctcgcaggcaaacaatgcg
ggctccatcgccttgggcgacgcggcgacggtgtcggcggcggcgacgcaaggaattgcc
attggttccggcgcctcttccaataatcccggcgctgtggcgttgggcgcaggcagcacc
acggcggcggctatagcaaccacgggcgtgaccattaacggcacggcctacaattttgcc
ggcaccacgccggcaagcacggtgagcgttggcgccttcggcgcggaacgtactatcacc
aacgttgctgccggccagatcagtgcgattagcaccgatgccataaatggttcgcaattg
tttgccaccaatacagcgatagacaccctgggtacgaccgtcacgaacatcaccaacggc
aaggccggcccgttcgtgtcggataacagcataacggcggtacagccggtctcgagcggc
gccaatgccagcgccggcggcttcggcgcgactgcaactggcgccgcttccacggtgctg
ggcaatcaggcgaccgataacggcaacgccgacgccacggtgctgggacaaggtgcgagc
attgcggtcgggaccagcggcagcaatgtcgccttgggccagggcagcacggtgacaagt
gcggcgatagcaactaccggcgcgacgatcggcggtactgcctacatctttgccggcggc
gcaccgataggcgtggtgagcgtgggcagcgtagggggggaacgtcagatcacaaacgtg
gcggctgggcagttgagcgcaagtagcaccgatgcagtcaacggttcgcaattgtatgca
accaaccagcaggtcaccgtcaacaccacgaatattgcgggtaatacggcagcgattagc
aatatcaccgccggtaaggccggcccgttcgtgtcagacagcagcgtgacggcgacgcag
ccggtatcgagcggcgccaatgccagcgccggcggcttcggcgcggtagcgtccgcaacc
aatagtacggcgttgggcaacggcgcacaggccaccgctgcaaatagtaccgccattgga
caaggggctactgccagcacagccaacagcgtggcattgggtaatgcttcgaccacagga
gctgcggttgccaccactggcaccacgatcagtggcaatagctacaactttgctggggca
gcaccggtaggggtggtcagcgtcggcagcgccggcagcgaacggcaggtcaccaatgtg
gcggccggccagcttaccgccagcagcacggatgccgtgaatggcagccagctgtttgcg
accaataccgcgatcaataacctgacctcggtggtggcgctgggccagaccaagtactac
agcgtcaattcgacgggcggcagtaatgagcacaacgaaggggcgacgggacaggacgcc
attgcatccggcaagaatgcggctgccaccagcatgaacgcagtggcgatcggctccgga
gcaagtgcgacagccagcggcggcgtggcgctgggtggcggtgcaacggctgaccgcgcc
ggcatgaacggcggcaaggagcagttctccaatacggtggtgtcgtcgacgcaaggtgct
gtttcagtaggcagcgtcggcaatgagcgtcagatcaccaatgtggcgggcggaacgcag
gcaaccgacgcagtcaatgtgcgccagttgcaagcggtgcagtcaggcggggtgcgttac
gacaccaatcctgacggcagcaccaactacagcagcgtcaccatgggcaacggcagctcg
gccggtccggtaaccatccataacgtcgccgccggaaccgcaccgacggatgccgtcaac
gtccagcaattcaatagcggcctaggggcagcggtacagcaagccaaccagtacaccgat
agcagagtacaagccttgcagaattcagtcgactcgaatcggcatgatgctgatgggggc
tccgctgcggcgatggcagtaggtggattgccgcagccttcagcgcctgggaagagcatg
gtggcgattgccggaagtacgttccaagggcaaaccgggttagcgttaggtatttcgact
atctccgaaaacggacgttgggtctacaaggctgctgcgacatcgagtagccgaggtcaa
acaggcggtgtggtatcagctggcttccagtggtaa
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