Collimonas pratensis: CPter91_3505
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Entry
CPter91_3505 CDS
T04306
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpra
Collimonas pratensis
Pathway
cpra03030
DNA replication
cpra03430
Mismatch repair
cpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPter91_3505 (dnaQ)
03430 Mismatch repair
CPter91_3505 (dnaQ)
03440 Homologous recombination
CPter91_3505 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpra03032
]
CPter91_3505 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_3505 (dnaQ)
Enzymes [BR:
cpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPter91_3505 (dnaQ)
DNA replication proteins [BR:
cpra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPter91_3505 (dnaQ)
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPter91_3505 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
SSV1_D-63
Motif
Other DBs
NCBI-ProteinID:
AMP05828
UniProt:
A0A127R0J5
LinkDB
All DBs
Position
complement(3605859..3606596)
Genome browser
AA seq
245 aa
AA seq
DB search
MRQIVLDTETTGLNPRTGDRIIEIGCVELLNRRLTGNNFHRYINPERDSEEGALAVHGLT
TAFLSDKPKFAEIFEELREYTRGAQVIIHNAPFDLGFLDAEYKHLGKSPFSADVAGVIDT
LVQAKEMYPGKRNSLDALCDRYGISNAHRTLHGALLDSELLAEVYLAMTRGQNSFSIDPG
SSHGDADGDGAALELLPLAEIVVRSASEEELAAHELLLNGLDKDAKGTCIWRKTPAEPVE
NAPPQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaaattgttctggataccgagaccaccggcctcaacccgcgcaccggcgaccgc
atcatcgaaatcggttgcgtcgagctgctgaaccgccgcctgaccggcaataattttcat
cgctacatcaatcccgaacgcgattcggaagagggcgcgctggcagtccacggcctgacc
acggccttcctcagcgacaagccgaagttcgccgagattttcgaagaactgcgcgaatac
acccgcggcgcccaggtcatcatccataacgcgcccttcgacctgggcttcctcgacgcc
gaatacaagcacctaggcaagagcccgttctcggccgatgtcgccggcgtcatcgacacg
ctggtgcaagccaaggaaatgtatcccggcaagcgcaactcgctggacgcgctatgcgac
cgctacggcatttcgaatgcgcaccgcaccttgcacggcgcgctgctggattcggaattg
ctggccgaggtgtacctggccatgacgcgcggccagaacagcttcagcatcgatcccggc
agcagccatggcgatgccgatggcgacggtgcagccttggagctgctgccgctggcggaa
atcgtcgtgcgcagcgccagcgaggaggagctggcggcacacgaattgctgctcaacggc
ctggacaaagacgccaaaggcacttgcatatggcgcaagacgcccgccgaaccggtagaa
aatgcgccgccgcagtaa
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