Collimonas pratensis: CPter91_3678
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Entry
CPter91_3678 CDS
T04306
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
cpra
Collimonas pratensis
Pathway
cpra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPter91_3678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Big_7
Motif
Other DBs
NCBI-ProteinID:
AMP05999
UniProt:
A0A127Q7G0
LinkDB
All DBs
Position
complement(3788387..3792223)
Genome browser
AA seq
1278 aa
AA seq
DB search
MTSNKKTSDVSALSDESNSTAFLAEAAKPVVSQGLVAASSVASVEVAAVDASALPATTIS
RIRDDFGSEQGFVKSGGTTDDIKPQIFGNAAPNTLVVIHDGADNPIGSVQTNNLGQWIFQ
VPADKTLSDGMHTITAVAANGQGSAGYEINVDTSAVVSTPRIYALGDDVGPEQGQFSPGI
KPGTGMIATINTDDAHPTLYGEATANRLVMIYDGVDNLIGSAQADGAGRWSFTPEEALSN
GTHTLTAVGDGRVSSGFSINIDAAQPADGEKVEVPGTEPVLNLVIDSAFDNFGATGHIGN
GGKTDDTTPLLQGHGAPANALLTIYDGSTRLGETLANAEGNWQFYVSVKAPLAPGEHAFA
AVFATPEGSESRSEPFVLNITAPEPITAPEPVKLVIDSAYDGAGLITGEVKSGATIDDVR
PIIRGHGGEPGTVIEIHNEKGELVGESRVNQFGDWNAKIYAGTPLALGEHVFTAVSDGGA
VSEPFTLHVDIPASSRPTIDVIFDNVGVTGEFSSGDTIDDRSPTLRGHGEPNTQVAVYID
GALTDYASVGEDGSWAYRISYNKPLSPGEHEFKVSGLGIASEPFVLTVGDTEPVLKPVIE
SAYDDFGAPGYISHNGNTDDRTPLLQGKGAQPYGQLEVYDGNTRLGYASVDGRGNWYFSV
KSELAAGEHAFTVVGAGVASDAFVLNITAPGPAKPVIESAYDDFGVSGYVSHNGNTDDRT
PRLEGKGAQPHGQLEVYDGSTRLGYATADGRGNWYFDVVKSELAVGEHTFKVVSAGVTSD
AFVLNITAPDSPKPVIDLAFDNFGAAGDVSHNGSTDDRTPQLQGKGAQPFALLEVYDGNT
RLGYAYVEESGNWSFNVKSALAIGEHAFTVVSGGVASDAFVLNITAPDTAKPVIDSAYDD
FGATGYIGHDGSTDDRTPKISGHGQPFAQIALFEGDVNLGYAQVKEDGSWSLYPRQQLDI
GEHVLTVVDASGVKSEAFVLHVTAPDSAKPTIDAVIDNVGAVEELHSGATTDDARPTFHG
HGQEGTYVYLLDGAAQVGAALVGEDGSWTLNALKQLTPGEHVFTVVGDGVTSDPFTLTVD
NVPETPRPTIESAVDDVGVTGILASGNTTDDFQPVFHGHAEADAPVISFYDGGKYIGETS
VHADGSWVFNLISGSQSIVLPPGEHSITATTDGVVFSEPFVLHVVEPTPAGAGVQAVETA
DGANLNLSLADLLQAPGELFASATDIPPAGQTAQVFNLSGGEFDAALSHADSSSALDGVS
ISLPPQQPLSELHELHAA
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaataaaaaaacttctgatgtatccgctttatccgatgaatcgaacagtaca
gcttttcttgctgaagctgcaaagcctgttgtcagccaaggtttagtcgctgcctcctca
gtcgccagtgtggaagttgctgctgttgatgcttctgctttgccagcgacaactatcagc
cgaatcagggacgatttcggttctgagcaaggctttgtcaaatcgggtgggaccaccgac
gacattaaaccgcagatattcggtaacgctgctcccaatactttggtggtgatccatgat
ggagccgacaaccctattggttcggtgcagactaataacctgggtcaatggatattccag
gttccagcggataaaacactgagcgacggtatgcataccatcacggcggtagccgccaat
ggtcaaggcagcgccggctatgaaatcaacgttgacacttcggcagtggtgtcgacgccg
cgaatctatgcccttggcgatgatgtaggtcctgagcagggtcagttttccccaggtatt
aagccgggcactggcatgattgctactataaacacagatgatgcgcatccgactctgtat
ggagaagcgaccgccaacagactggtcatgatctatgatggcgtggacaatctcatcggc
tcggcgcaggccgatggcgccggtcgctggtcattcaccccggaggaggcacttagcaac
ggtacccacactctcactgctgtgggtgatgggcgtgtcagcagtggtttttcgattaat
atcgacgcggcacaaccggcggatggcgagaaggtggaggtgcccggcactgagccggtc
cttaatctggtgatcgattcggcgtttgataacttcggcgccactggccatatcggcaat
ggcggcaagactgacgacaccacaccgctgctgcaaggccatggtgcgccggccaatgct
ctgttgaccatctacgacggcagtacccgcttaggtgagacccttgcgaatgcggaggga
aattggcaattctatgtcagtgtaaaggccccgcttgcgccaggtgaacatgcgttcgcg
gcagtattcgccacgccggaaggcagcgaatcgcgctcagaaccgttcgtgctgaatatc
actgcgccggaacctatcactgcgccggaacctgtcaagctggtgatcgacagtgcttat
gacggcgccgggctcattactggagaagtaaagagcggcgccaccatcgacgacgtgcgt
ccgattattcgggggcatggcggcgagccggggactgttatcgagattcacaacgaaaaa
ggcgagctggtaggagaatctcgcgttaaccagttcggcgactggaatgccaagatctat
gctggcactccgctggcattgggtgagcatgtgtttactgcggtcagcgatggtggcgca
gtgtcggaaccgttcacattgcacgtggacattcctgcttcgtccaggccaaccattgat
gtgatattcgacaatgtgggtgtgactggggagttttccagcggcgacacgatagatgac
cgctcgccgacgctgcgcggtcacggtgaacctaatacacaggtggctgtttacatcgac
ggcgctctgaccgactatgcgtcggttggggaggacggttcttgggcataccgcatttct
tataataaacctctgtcgccaggcgaacacgagttcaaggtaagcggcttaggcattgcc
tccgaaccgtttgtactgacagtgggcgacactgaacctgtccttaagccggtgatcgag
tcggcgtatgatgacttcggcgcccctggttatatcagccataacggcaacactgacgac
cgcacgccgctgctgcagggcaagggcgcgcagccatacggccagctggaagtctacgat
ggcaatacccgcctgggctatgccagcgttgacggccgcggcaactggtacttcagcgtg
aagagcgagctggcagcgggcgaacatgcgttcacggtggtgggtgcaggcgttgcttcc
gacgcatttgtgctgaacatcacggcgccaggtccggccaagccggtgatcgagtcggcg
tatgatgactttggcgtctctggctatgtcagccacaacggcaacactgacgatcgcacg
ccgcggttggagggcaagggcgcgcagccgcacggccagctggaagtctacgatggcagc
acccgtctgggctatgccactgctgacggccgcggcaactggtactttgatgttgtgaag
agcgaactggcggtgggtgaacatacgttcaaggtggtgagtgcgggagttacttccgat
gccttcgtgctgaacatcacggcaccggattcgcccaagccggtgatcgacttggcattt
gataacttcggtgccgctggtgacgtcagccataacggcagcactgacgaccgcacgccg
cagttgcaaggcaagggcgcacagccattcgctctgctggaagtctacgatggcaacacc
cgtctgggttatgcctatgttgaggaaagcggcaactggtccttcaatgtgaagagtgcg
ttggcgatcggcgaacatgcgttcacggtggtgagcggaggagtggcttccgacgccttc
gtgctgaacatcacggcgccggatacggccaagccggtgatcgactcggcgtatgatgac
ttcggcgccactggctatatcggccatgatggcagcacggatgatcgcacgcccaagatc
agtggtcatggtcagccatttgcccagatagccctgtttgaaggcgatgtcaatctgggc
tacgctcaagtcaaggaagatggcagctggagcttgtatccgaggcaacagctggacatt
ggcgagcatgtgctgaccgtggttgatgccagcggcgtgaagtctgaagccttcgtgttg
catgtgactgcgccagattcggcgaagccgacgatcgatgcagtcatcgataatgtcggt
gccgtggaagagcttcacagcggggcgactactgatgatgcgcggccgacattccatggt
cacggtcaggaagggacttacgtgtatctcctcgatggcgcggcacaggttggcgctgcg
ctggtcggcgaggacggcagctggaccttgaatgccctcaagcagctgacgccgggtgag
catgtgtttacggtggttggcgatggcgtgacatcggatccgtttacgctgacggtggat
aacgtgccagaaacaccgaggccgacgattgaatcggctgtggatgatgttggtgtgacc
ggcatccttgccagcggcaacaccaccgacgatttccagccagtgtttcatgggcatgcc
gaggctgacgctccggttatctccttctacgatggcggcaaatacatcggcgagacttcg
gtgcatgctgatggcagctgggtgttcaatctgatctcgggaagccagagtattgtcttg
ccgccaggagagcattcgattacggcaaccacggatggtgtagtgttctctgaaccgttt
gtactgcatgtcgtggagccaacgcctgctggtgccggcgtccaggctgtggaaacagcc
gatggcgcgaacctgaacttgtcgctggcggatctgttgcaggcgcctggcgaattgttc
gccagcgctaccgacatccctccagctggccagaccgcgcaagtgttcaacttgagcggc
ggcgagttcgatgcggcgctgagccatgcggactcctcgtcagcgctggatggcgtcagt
atcagcctgccgccgcaacagccgttgtcggagctgcacgagctgcatgctgcataa
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