Collimonas pratensis: CPter91_3812
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Entry
CPter91_3812 CDS
T04306
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpra
Collimonas pratensis
Pathway
cpra03420
Nucleotide excision repair
cpra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPter91_3812
03430 Mismatch repair
CPter91_3812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_3812
Enzymes [BR:
cpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPter91_3812
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPter91_3812
MMR (mismatch excision repair)
Other MMR factors
CPter91_3812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
AAA_11
UvrD_C_2
UvrD_C
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AMP06133
UniProt:
A0A127Q7W7
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All DBs
Position
complement(3943935..3945797)
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AA seq
620 aa
AA seq
DB search
MWDDPIDEKIYGYLNFAKPESFMLLAGAGSGKTKTLVAVLEAIKQEHASRLALDGQRVAI
ITYTNAACEEIKDRLKRDPAFSVSTIHSFSWELIKSFTPDIRAWLREKFVADIAKLDIDI
GRARDLEGVTARRNIRSREGKKKRLESLDTVLSFSYTPNSISTEVGSVHHSEVVGLAAYF
LANEPLMGRILVNQFPILLIDETQDTNAALLDALIAVQAANSKNFSIGLFGDMMQQIFGG
GKTDLVETLPVTWLRPEKKINYRCPRRVITLINKIRLLDDPHQQHPGPDCIEGAAILFIA
SSDSAKSKAEVEAIARQEMVDRTNDAGWESKLKVKTLTLEHHMAAVRGGFDDFLVPFLGI
DHLKDAALSGDSKEIKFIRHVFLPLIIAIKSGDDFATAKVVRDHSPLLKPAHLRGHADPI
GEIRAANIVVEHVATALAKNPECSIISVLKIIEAGNLLTIPDDFLPYLIDKPKGPEEGVE
DNELESAESKAWDSALSAAVGQAERYVDYISDSSNYDTHQGVKGLQYERVMVVLDDAQAR
GSGFSYEKLLGAKALSADDLKNEREGKDTAVKKSRRLLYVTCSRAQKSLAVVAYSKDPQA
IKDYVVKSKWFEVDEVVSIE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgtgggatgacccgattgacgaaaaaatttatggttatctgaactttgcgaagcccgag
agtttcatgttacttgcaggagcgggttccggaaaaacgaaaacgttagttgcagtgttg
gaagcgattaagcaagagcacgcgtcacgcctagctcttgatggacaacgcgttgcgatc
ataacttatacgaatgctgcctgtgaggaaattaaggataggctgaaacgtgatcctgcg
tttagcgtatcaactattcacagcttttcgtgggagttgatcaagtcctttactccggac
atccgcgcatggctaagagaaaaatttgtggccgacatagcgaaactcgatatcgatatc
gggcgcgctcgtgatctggaaggagtgacggccagaagaaatatcaggagtagggagggg
aaaaagaaacgcttggagtcgctcgacactgtattgtcgttttcgtacactccaaatagc
attagtacagaagtaggatcggttcaccattctgaagttgttggattagcggcatatttt
ctagcgaatgagccgctgatggggcgaatccttgtgaatcaatttccaattctgttaatc
gacgaaacccaggacaccaatgccgcgttgctggatgcacttattgccgtccaggccgca
aactccaagaactttagtattgggcttttcggggatatgatgcagcagatttttggtggg
gggaaaacagatctggttgaaacgttgccggttacttggttgagacccgaaaagaagatt
aattatcgttgcccccgacgagttataacgctgatcaacaaaatccgcttgctcgatgat
cctcatcaacaacatccaggccccgactgcatcgagggtgctgcgattctgtttatagca
agctctgatagcgccaagagtaaggcagaggtcgaggcaattgcgcggcaagaaatggtg
gatagaacgaatgatgcgggttgggagtcaaagcttaaggtcaaaacgctcacactagag
catcatatggctgcggttcgagggggatttgacgattttttggttccttttcttgggatc
gaccacttgaaagacgcggcgctgagtggtgatagtaaagagatcaagttcatccgacat
gtcttcttgccacttataatcgcgatcaaatctggcgatgatttcgcaactgcaaaagtg
gtccgcgaccactcgccgttacttaagcctgcgcacttacgtggtcacgccgaccccatc
ggcgaaattcgtgcagcaaatattgttgtggaacacgtggcaacggctctcgcaaaaaat
cctgagtgctccatcataagcgtattaaaaataattgaagcgggaaatcttctaaccatc
ccggatgactttcttccatatttgatcgataagccaaaggggcctgaggaaggcgtggaa
gataatgagttggaaagcgccgaatctaaagcgtgggattcggctctcagtgctgcagtt
ggtcaagcagaacgatatgtggattacatatcggattcctctaactatgatacgcaccaa
ggtgtgaagggcttgcagtacgaacgtgtcatggttgtgctggacgacgcgcaggcgcga
ggttctggttttagctacgaaaaattgttgggtgcaaaggcattgtcagccgacgacttg
aaaaacgaacgcgagggcaaagacaccgccgtcaagaaatctcggcggctgctttatgtg
acttgcagccgcgctcaaaagagtttggcggttgtggcatacagcaaggatccacaggcg
ataaaggactatgttgttaaatcgaaatggtttgaggtggacgaagttgttagcatcgag
tga
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