Collimonas pratensis: CPter91_3843
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Entry
CPter91_3843 CDS
T04306
Symbol
impB
Name
(GenBank) RHS repeat-associated core domain protein
Organism
cpra
Collimonas pratensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Endonuclea_NS_2
RHS
TEN_YD-shell
VirE3
OCRE
Motif
Other DBs
NCBI-ProteinID:
AMP06164
UniProt:
A0A127Q814
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All DBs
Position
complement(3975395..3980059)
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AA seq
1554 aa
AA seq
DB search
MTNAAKHFDPQIGIDIHMYEMPPGPLPTAHISIVLDPFDYLPFIGATVQVAGVKRATAGT
QGLSVHIPLGVWMPPLRAPEGPQFDDQIFMGSKTVLADGSPFSRLGMPVLDCSVVGMVPP
FRLKKSAEPHMSMTLPTSVNLAIPDTVFVGGPPSIMEALEGIAAQLALAGLVKGLGKGLK
ALRETKYFKRAADALKTKYKKLFENMEAGFLKCKVLRAEPVDIRDGSVAVSHQDFSIPGR
LPLSWTRNYSSSNCHDGMCGYGWQTPADFRLEIDADGAVLFFEASGATVFAHLPAAPGIE
HAVTEFVDGTRLIWVQDNGTDILQVLTKDDLRYVFCNLAANVTPARQTLSLKIERIEDLC
GNYWRFERVDGHLTRIVESGIDILPGRFIEVHEHDGKIHQLSLYDPATGLTHPLAAYKYL
NRDMIAALDALNAARTFEYDRHHMVRHADRLGLSFYYTYDDRWRAIRAWGDHGLHDYRFT
YNESLRETEVIDSFGYTSLIKFDQNNLPLCEIDPLGGVTVFEYDEVGRTTAVIDPVGLRT
EFAYDERGNLLTLVQPDGSIMTAVFDEANHVVEIIDPLGQRWRQKWDERGLLLEQTTPMG
ACSRFEYDALGHLLAHVNPRGATTALSFDRYGNLLRMTDALGHHSDFEHDALGYLRRRTD
PVGDVIEYCYDAKGRLLQVMQAAGGAKYEYDEEDRLIGYSDENGAQTKLAYFGTGQLAKR
LQADGYCVEFLYDVEERLIGVVNQRKETYQIKFDELGRIVEEIDYWGQSCTYRYDAAGRL
LGSCDPLGRIISYDTDRHGRITRKALPDHDHPGKQLYETFCYDKRGALVELRSQSRHILR
KFDADGRLREEVQDGFRIENVYDEVGNRLLRRTSAGNLVISTFDLRNQIASVTVNDEPAV
VIERDVLGRIVTEQLSSSVRRDLKYDPAGYLTAQTVLNDKGSLFETRYEYDCVGNQIRRS
DSEQGINLYQYDLMGNLLRHTDPAGRVTEILNDPAGDRLRMRIHQAELKQVVGGEGLVET
SWFREGNHDGMDYIFDRAGNLIQKQQTSSGKTQSHLAAAFDQTQTKLSWDANQRLIESCN
NGQVTRYGYDPLGRRVFKHSPTHITWFFWDGDALLGEVTQSIDTKNSDDIWLAANVADLM
AARRRLSAFKALHSQTREFVYYPDTFVPLVLIDRQVKFAKRTDRITGKKADFYPVQQVQA
KPTAVPVNVFLDRMPKSSMTDQLGGLGGLGSLTLGKESKPVSSDHGGNRQARLAGVEASI
GLGSGMLLGVHANDLPSPVSQPINASATAIGSRPEMGVIRQQQFDEKKNGGIFHYHNDPN
GCPIKLTDSSGQVVWSASYAASGRAQQIHIQTVDNPIRLQGQYYDAETELHYNRNRYYDA
HIGSFVSQDPIGLSGGVNPYQYAPNPVGWIDPLGLFSNATYVYSADGKRIESATATITPA
DIKKGSNTNDTSRKWARSLGCSHDDAGHVVGNQLGGRGGKKYVFPQALGVNRGAFAQWES
GIAEQVKAGNVNADISVKLNYKDAVSTRPHEIVYSYTINGQTRSKTFMNPACCP
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgccgccaaacatttcgatccacagattggcatcgatatccacatgtacgag
atgccgccgggaccattgccgaccgcgcatatttcgattgtgctggatcctttcgattat
ctgccgttcatcggcgccacggtgcaggtggccggcgtcaagcgcgccacggcaggcact
caaggattgtcggtccacatccccctgggagtgtggatgccgccgctgcgtgctccagag
ggaccgcagtttgacgaccagatcttcatgggcagcaagaccgtgctggccgatggctcg
ccattttcgcgcctgggcatgccggtgctcgattgcagcgtagtcggcatggtgcccccg
ttccggctcaagaagtcggccgagccgcatatgtcgatgaccctaccgacgtcggtcaac
ctggcgatacccgataccgtcttcgtcggcggtccgccgagtattatggaggcactggag
ggaatcgccgcccagctggcattggctggattggtcaaaggcctgggcaaaggtttaaag
gctttgcgcgagaccaaatatttcaagcgcgccgccgacgcccttaaaacgaaatacaag
aagctgttcgagaacatggaggccggcttcctcaagtgcaaggtgttgcgagctgaacct
gtcgatattcgcgatggcagtgtcgcggtctcgcaccaggatttctccatcccgggccgc
ttgccgctgagctggactcgcaattattcgtcgagcaactgtcatgacggcatgtgcggt
tatggctggcagaccccggccgacttccgcctggaaatcgacgccgacggcgccgttctg
ttcttcgaagccagcggtgccaccgtctttgcgcacttacctgcagcccccggtatcgag
cacgctgtgaccgaatttgtcgatggcacccgcctgatatgggtgcaagataacggtact
gacatattgcaagtgctgaccaaggatgacttgcgctacgttttctgtaatctggctgcc
aacgtcacgccggcgcgtcagaccttgtcgttgaagatcgaacggatcgaggatttgtgc
ggtaattattggcgcttcgaacgtgtcgacggtcatctgactcgaatcgtagagagtggt
atcgacatcttaccggggcgtttcatcgaagtacatgagcatgatggaaaaattcatcaa
ttaagcttatatgatccggccaccggcctgacccacccgctggcggcatacaaatatttg
aatcgggacatgatcgctgcgctcgatgcgctcaatgccgcccgtactttcgaatacgac
cgccatcatatggtgcgtcatgccgatcgcctgggcttatccttctactatacatatgac
gatcggtggcgcgcgattcgcgcttggggggatcatggactgcacgactatcgatttacc
tacaatgagtcgctgcgcgaaaccgaagtaatcgattcgtttggatacacctcgctgatc
aagttcgatcagaataatttgccgttgtgtgaaattgatccactcggaggtgttacggtt
tttgagtatgacgaagtagggcgcaccaccgcagtgattgaccctgtaggattgcgcaca
gagttcgcatatgatgaacgcggcaatttgctgacgctggtgcaaccggacggcagtatc
atgaccgcggtttttgacgaggccaatcacgtcgtcgagattattgatccgctcggtcag
cggtggcggcaaaaatgggatgaacgtggtttgttgctggagcagaccacgccgatgggt
gcttgttcgcgctttgagtatgatgcactggggcatttgcttgctcatgtcaatccgcgt
ggggcaaccactgcactttctttcgaccgttatgggaacttgttgcgcatgactgatgcg
cttggtcaccacagtgatttcgagcacgatgcattgggatatttaaggcggcgtactgac
cctgtcggcgacgtcattgagtattgctacgatgctaaagggcgattgcttcaggtaatg
caagctgcgggcggcgcaaagtatgaatacgatgaagaagatcgcctgattggttatagc
gacgagaacggggcacagaccaaacttgcgtattttggcacaggacagctcgctaaacgt
ctgcaagccgatggttattgtgtcgaatttctatatgacgttgaagagcggctgattggc
gtggtcaatcaacgtaaggagacctatcagatcaagttcgatgagctggggcgaattgtc
gaggaaatcgattactgggggcagtcatgtacttatcgttacgatgccgcaggccgatta
ttgggaagctgcgatccgttgggacgaataatcagctacgacaccgatcgacacggccgt
attaccaggaaggctctgcctgatcacgatcaccccggtaagcaattgtatgagacattc
tgctatgacaagcgtggagcgttggtcgagttacgcagtcagagtcgtcatatcttgcgt
aaatttgacgctgatggtcggcttagagaagaggtgcaagacgggttccgtatcgaaaat
gtctatgacgaggtcggtaatcgtcttttgcgccgcaccagcgccggcaacctggtaatt
tcaactttcgatttgcgcaaccaaatagccagcgtgacggttaatgatgaacccgcggtg
gtgatcgaacgcgatgtgctggggcggattgtgacggaacagttgagtagtagcgttcgc
cgcgatttgaaatatgatcctgcaggctatctcactgcccagaccgttctgaatgataaa
ggatcattgtttgaaacccgctatgagtatgattgcgtcggtaaccagatacgtcgcagc
gatagcgaacaggggattaatctttatcagtatgaccttatgggaaatttattgaggcat
acagatcctgccggacgtgtgacggagattttgaatgatccggccggtgatcgcctacga
atgcgcatacatcaagcggaattgaagcaggtagtgggcggcgaaggtctggtcgaaacg
tcgtggtttcgtgaaggcaaccatgacggtatggattatatttttgatcgtgccggcaat
ctgatccaaaaacagcaaacctcatcaggaaaaacgcaatctcatttagctgcggcattc
gatcaaacacagacaaaactgagctgggatgctaaccagcggctgattgaaagctgtaac
aacgggcaggttacacgatacggctacgatcccctggggcgccgcgtattcaagcatagt
ccgacgcatatcacctggtttttttgggatggcgatgcgttattgggagaagtcacgcaa
tcgattgataccaaaaactccgatgatatttggctggctgccaatgtggcggatttgatg
gcagcacgaagacggcttagtgcatttaaggcattgcattctcaaacgcgagagtttgtt
tattatcctgacacttttgtgccgttggtattaattgacagacaggtcaagtttgcaaag
agaacagatcgcatcacgggaaaaaaagcagatttttatcctgtccaacaagtgcaggcg
aaaccaaccgcagttcctgttaatgtgtttcttgataggatgccgaaatcttcgatgacc
gaccagctaggcggactgggtggactcggtagtctgactttggggaaagaaagcaagccc
gtttcatcggaccatggtggaaaccggcaagcacggctcgccggcgtggaggcgtctatt
ggattaggttccggaatgttgttgggtgtccatgctaatgacttgccatctccggtttcc
caaccgattaatgcgtcagcgacagctatcggaagtcggccggaaatgggtgtaatccga
caacagcaatttgatgagaaaaaaaatggtggcatatttcattatcataatgatccaaat
ggctgcccgatcaaactaactgatagcagcgggcaagtggtttggtcagccagctatgcc
gcatcgggccgtgcgcaacaaatacatatccagaccgttgataatccgatccggctccag
ggacaatattacgacgcggagacagagcttcattacaatcgaaatcgctattacgatgcg
catattggtagttttgtgagccaagacccgatagggctgtcgggtggggtcaatccctat
caatatgcaccgaatcctgttggctggattgatccgctaggattgttttcgaacgccacc
tatgtttatagtgctgatggaaaacggatagaaagtgcgaccgcgacgattacaccagct
gatattaaaaaaggtagcaacacaaacgacacttcccgtaaatgggcgagaagtctcggc
tgttctcatgatgatgccggccacgtagttggaaatcaattaggtgggcgtggcgggaag
aagtatgtttttccgcaagcgcttggcgtgaacaggggagcgtttgcgcaatgggagagt
ggtatcgctgagcaggtgaaagctgggaatgtgaacgcagacattagtgttaaattaaac
tataaagacgccgtctcgacacgaccgcatgaaatagtttattcctatacgattaacggt
cagacaagatcaaagaccttcatgaatcccgcttgctgtccgtaa
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