Collimonas pratensis: CPter91_3869
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Entry
CPter91_3869 CDS
T04306
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cpra
Collimonas pratensis
Pathway
cpra00061
Fatty acid biosynthesis
cpra00071
Fatty acid degradation
cpra01100
Metabolic pathways
cpra01212
Fatty acid metabolism
cpra02024
Quorum sensing
cpra04146
Peroxisome
Module
cpra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CPter91_3869
00071 Fatty acid degradation
CPter91_3869
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CPter91_3869
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPter91_3869
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cpra01004
]
CPter91_3869
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpra04147
]
CPter91_3869
Enzymes [BR:
cpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CPter91_3869
Lipid biosynthesis proteins [BR:
cpra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CPter91_3869
Exosome [BR:
cpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
CPter91_3869
Exosomal proteins of breast cancer cells
CPter91_3869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
BKACE
Motif
Other DBs
NCBI-ProteinID:
AMP06190
UniProt:
A0A127Q7Y4
LinkDB
All DBs
Position
complement(4011780..4013438)
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AA seq
552 aa
AA seq
DB search
MDEQKNSVQMMLQWAAAKPNAPWLLQPVLGQWKATTWAHGSDQVRRMAAALKAMNWEPGS
RICISGRNTAHWIMADLAISMAGHVSVGMYPKQAAATTRYIFEHSEAKAVFLGPMPDADD
FTGAIPDSVRTISFPYQEAPAGQLTWDELVAATAPMAIEEYLAPAPEALMTLIYTSGTTG
KPKGVMLSYGNVLFAVYSIMNLAPSLGQERYFSYMPLAHAFERFAIALPSCYNGGEVHFL
ENVDKMGEQLAQVAPTRFFGVPLVYGRIQTAILHKMPQQKLDRLMKIPLLRTIVRRKIRV
AVGLQHVRFCLSGAAPIPAALLDWYQRNLGLTVLQGYAPTEASVYSSACLPDQNRVGSVG
KPPQNAGFKLSEDGEILFKHPGLMMGYYKDPESTRAAFTEDGYLRTGDQGRVDEDGYLYI
TGRVKDIFKTAKGKYVAPAPIECSLARNTDVENLLFIGNGMNQPVMAVTLTAAARSKPRA
AVEQGLIDDMAAVNATLEPHEKIAKCVVLKDAWSIDNGLMTPTMKVKRSEVEKRYAGLME
RELQVRSAVGWE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaacaaaagaattcggtgcaaatgatgttgcaatgggccgctgccaagcccaat
gcgccttggctgttgcaaccggttttggggcaatggaaagccaccacttgggcgcacggt
agcgatcaggtgaggcgcatggcggcggcgctgaaagccatgaactgggagccgggcagc
cgcatttgcatctctggccgcaataccgcgcactggatcatggccgacctggcgatttcc
atggccggccacgtcagcgtcggcatgtatccgaaacaggctgcagccaccacccgttat
atcttcgagcatagcgaagccaaggcggtgttcctcgggccgatgccggacgcagacgat
ttcaccggggcgattccggactcggtgcgcaccatttcctttccctatcaggaagcgccg
gccgggcagctcacatgggatgaactggtcgccgccaccgcgcccatggccatcgaggag
tatctggctccggcgccggaggcgctgatgaccttgatttatacctccggcaccaccggc
aagccgaagggcgtgatgctcagctacggcaatgtactgtttgccgtctacagcatcatg
aacctggcgccgtcgctcggtcaggaacgctatttttcctacatgccgctggcgcatgcc
ttcgagcgctttgccattgcgctgccgagctgctacaacggcggcgaagtgcacttcctt
gaaaacgtcgacaagatgggagagcagctggcgcaggtcgcgcctacccgtttctttggc
gtgccgctggtctatggccgtatccagaccgcgatcctgcacaagatgccgcagcagaag
ctggaccgcctgatgaagatcccgctgttgcgtactatcgtccggcgcaagattcgggtg
gcggtcggcttgcagcatgtgcgcttctgcctgtccggggcggcgccgataccggcggca
ttgctggactggtaccagcgcaatctcggactgacggtgctgcaaggctatgcacccacc
gaagcctcagtctattccagcgcctgcctgccggaccagaaccgcgtcggctcggtcggc
aagccgccgcagaacgccggcttcaagctgtccgaagacggcgaaatcctgttcaagcat
ccgggcttgatgatgggctattacaaggatccggagagcacgcgcgcggccttcaccgaa
gacggctatctgcgcaccggcgaccagggccgggtggacgaggacggttacctgtatatt
accggccgcgtgaaagacatcttcaagaccgccaagggaaaatacgtggcgccggcgccc
atcgaatgttcgctggcgcgcaataccgacgtcgaaaacctgctgttcatcggcaacggc
atgaaccagccggtgatggcggtgaccctgaccgcggcggcccgcagcaagccgcgggcc
gcggtggagcagggattgatcgacgacatggctgcggtcaatgcgacgctggagccgcat
gaaaagatcgccaaatgcgtggtgctgaaagatgcctggagcatagacaacggcttgatg
acgccgaccatgaaggtcaagcgcagcgaggtggaaaagcgctatgccggcctgatggag
cgggaactgcaggtgcgcagcgcggtcggatgggaatga
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