Collimonas pratensis: CPter91_4593
Help
Entry
CPter91_4593 CDS
T04306
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpra03032
]
CPter91_4593 (ihfB)
03036 Chromosome and associated proteins [BR:
cpra03036
]
CPter91_4593 (ihfB)
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_4593 (ihfB)
DNA replication proteins [BR:
cpra03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPter91_4593 (ihfB)
Chromosome and associated proteins [BR:
cpra03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CPter91_4593 (ihfB)
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CPter91_4593 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
AMP06899
UniProt:
A0A127QA08
LinkDB
All DBs
Position
complement(4750055..4750360)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIARLAERYPQLVAKDADYAVKTILDAMADALSTGQRIEIRGFGSFALNRRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcggagctgattgcccgcttggccgaacgttatccgcaactggtagccaag
gatgcggattacgcggtgaaaaccatactcgatgccatggccgatgctttatcgaccggc
cagcgtatcgagattcgtgggttcggcagttttgcgctgaatcggcggccaccgcggatc
gggcgcaatcccaagtccggcgacaaggtgatggtgcccgaaaaacgggtgccgcatttc
aagccaggcaaggaattgcgtgagcgcgttgatgccatggtcgggcaaccgatccgggaa
gactga
DBGET
integrated database retrieval system
