Collimonas pratensis: CPter91_4596
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Entry
CPter91_4596 CDS
T04306
Name
(GenBank) helicase conserved C-terminal domain protein
Organism
cpra
Collimonas pratensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
DUF5462
Motif
Other DBs
NCBI-ProteinID:
AMP06902
UniProt:
A0A127QBA7
LinkDB
All DBs
Position
complement(4753065..4756532)
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AA seq
1155 aa
AA seq
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MNLTLADVRDVLHQATFDRGQEYVRLRRVLAVEQDGDVLNATVQGSGSNIYQQEITLSVF
RDTPDIDSVCSCPVGSNCKHVAAALIEYLQRPSADQLVIAAAPPVLPADKSVAAPRPAVA
KASPPPTLARPMEAWLSRVQGEVAGAIAPQQQQAGLRQKVATHQVVFVLTSAYNGKKAVL
HLCKAQPRPNGQFQAAQPVTDVPRLLADPVLFLRPEDRDLIGLFVAQNDGNHAQHAACEL
SGKLGAQLLRALLQQQRLLWANSLPDLAKGTAYPLQLAAPRRASLTWHEALDDGRDAARD
LWQLGWQFEAEAANGAASLRKSLDYMLPTEPPWYIDNLSCGELLLTQRDTRISSKALNDL
VIQAPMLDPDDSLAVAQQLLTQGLSDVIPFPPQVIQTVRRDIAPQPLLVLGNLPGVSNPL
MQDFAELHFRYDGALVSAQFALALSRNTPAGIEQVMRDQAAENALRQTLLGFGMRALEGT
QHPLAMMPGMFMLPDQSAWLRFAKEGLPQLIAQGWKIDKRAEYRFDVVEVEDWYAEIAET
DEAGASAAFDLQMGIVVNQQRVSLLPLLVDLIRHAPQDFDPRTMALRDDQDELLVRLSDG
VHVAMPWGRIKPILNTLGELYFTEKSEGPVRLSALDAARLAELDAGNQLRWVGGERLRSM
GQKLLTFGGIKQVSAPPGLQATLRDYQLQGLAWMQFLREYDLAGILADDMGLGKTVQTLA
HILIEKQSGRLTAPALVIAPTSLMDNWLQEAARFAPELRVLVLQGKQRLEQFEQIAGYDL
VLTTYALLPRDEEHWREHVFHLLILDEAHYIKNPRSKVAQSAALLNARHRLCLSGTPVEN
HLGELWAQFHFLLPGLLGDEKTFNRDFRQPIEKQGDATRRALLSRRIKPFLLRRTKDKVA
KELPPKTEMLRSVTLSGAQRDLYENVRLAMDKKVREEIAKKGVARSHIVILEALLKLRQA
CCDPRLLKTDQPEAEAAQAEMPSAKLLELLEMVDELRQEDRRILVFSQFTSMLTLIAAEL
RERDIGYALLTGATQDRVEPVRQFQEGEVPVFLISLKAGGVGLNLTAADTVIHYDPWWNP
AAESQATDRAWRIGQDKPVFVYKLIAKGTVEESIQLLQQKKADLAQAMLSPQGEEAQNVG
LTQDDLQAIFAPLAE
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgacacttgccgatgtgcgcgatgtgttgcaccaggcaacctttgaccgtggc
caggagtacgtgcggctgcgccgtgtgctggccgtggagcaggatggcgacgtcctcaac
gcaacggtgcagggcagcggcagcaacatctatcagcaggaaatcacgctgtcggtattt
cgcgatacgcccgacatcgacagtgtctgttcctgcccggtcggctccaactgcaagcat
gtggcggcggccttgattgaatacctgcagcggccttccgccgatcagctggtgattgcg
gctgcgccgccggtgctgcctgccgacaaatcagttgcggcgcccaggccggctgtcgcc
aaagccagcccgccgccgactctggcgcggccgatggaagcctggctgagccgggtccag
ggcgaagttgctggcgccatcgccccgcagcagcaacaggccggcctgcgtcagaaagtc
gcgacgcaccaggtggttttcgtgctgacctcagcctacaacggcaagaaggcggtgctg
cacctgtgcaaggcccagccgcggccgaacggccagttccaggctgcgcagccggtcacc
gacgtgccgcgcctgctggccgacccggtgctgttcctgcgccccgaagatcgcgacctg
attggcctgtttgtggcccagaacgacggcaaccatgcccagcatgcggcctgtgaactg
agcggcaagctcggcgcccagctgttgcgcgcgctgctgcagcaacagcgtctgctgtgg
gccaattccctgcctgacctggcgaagggcacggcctatccgctgcaacttgccgcgccg
cgccgcgccagcctgacctggcatgaagcgctggacgacggccgcgacgctgcgcgcgat
ctgtggcagctaggctggcaatttgaagcggaagcggcgaatggggcggcctccttgcgc
aagagcctcgattacatgctgcctaccgagccgccctggtatatcgacaatctttcctgc
ggcgagctgctgctgacgcagcgtgatacgcggatttccagcaaagcactcaacgacctg
gtgatccaggcgccgatgctcgatccagacgatagcctggcagttgcccagcaattgctg
acgcagggtttgagcgatgtcatccctttcccgcctcaggtgatacaaaccgtgcgccgc
gacattgcgccgcaacccttgctggtgctgggaaatcttcccggcgtcagcaatccgttg
atgcaggatttcgccgaactgcatttccgctacgacggcgcgttggtctctgcccagttt
gcgttggcgctgagccgtaacacgccggccgggatcgagcaggtcatgcgcgaccaggcc
gctgaaaacgccttgcggcaaaccttgctggggttcggcatgcgtgcgctggaaggaacg
cagcatccgctggccatgatgccgggcatgttcatgctgccggaccagtcggcttggctg
cgcttcgcgaaagagggattgccgcagctgattgcgcagggctggaagatcgacaagcgc
gccgaataccgtttcgatgtagtcgaagtagaagactggtatgccgaaatcgccgagaca
gacgaggcaggcgccagcgcggctttcgacctgcagatgggcatcgtggtcaatcagcag
cgggtatcgctgttgccgctgctggtggacctgatacgccacgcgccgcaggatttcgat
ccgcgcaccatggcgctgcgcgacgatcaggatgaattgctggtgcgtctgagcgacggc
gtgcatgtcgccatgccctggggccgcatcaagcccatcctgaacaccctgggtgagttg
tatttcacggaaaaatcggaaggcccggtgcgcttgtcggcgctcgatgcggcgcgcctg
gccgagctggatgccggcaaccagctgcgctgggtaggcggcgagcggctgcgcagcatg
ggccagaagctgctcaccttcggcggcatcaagcaggtgtcggcgccgcccgggctgcaa
gccaccttgcgcgactaccagctgcaaggattggcgtggatgcagttcctgcgcgaatac
gacctggccggcatcctggccgacgacatgggtctcggcaagaccgtccagaccctggcg
catatcctgatcgaaaagcaaagcggccgtctgaccgcgccggcgctggtgattgcgccg
accagcctgatggacaactggctgcaggaagccgcgcgctttgcgcccgagctgcgcgtg
ctggtattgcagggcaagcagcgcctggaacagttcgaacagatcgccggctacgacctg
gtgctgaccacttatgccttgctgccgcgcgacgaagaacactggcgtgagcatgtcttc
catctgctgatcctggacgaagcgcattacatcaagaatccgcgttccaaggtggcgcaa
agcgcggccctgctgaatgcgcggcatcggctgtgcctgagcggcacgccggtggaaaac
catctgggcgaattgtgggcgcagtttcatttcctgctgccgggtttgctcggcgatgaa
aaaacctttaaccgcgacttccgccagccgatcgaaaagcagggcgacgctacgcgccgc
gccttgctgagccgacgcatcaagcccttcctgctgcgccggaccaaggacaaggtggcc
aaggagctgccgccgaaaaccgagatgctgcgcagcgtgaccttgagcggcgcgcaacgc
gacctctatgaaaacgtgcgcctggcgatggacaagaaggtgcgcgaggaaatcgccaag
aaaggcgtggcgcgcagtcatatcgtgatcctggaagccttgctgaagttgcgccaggct
tgttgcgatccgcgcctgctcaagaccgaccagccggaagccgaagcagcacaggcggaa
atgccttccgccaagctgctggagctgctggagatggtcgacgagctgcgccaggaagac
cggcggatcctggtgttttcgcaatttaccagtatgctgacgctgatcgccgccgaattg
cgcgagcgcgatatcggctatgcgctgttgactggcgccacccaggaccgggtcgagccg
gtgcgccagttccaggagggcgaagtgccggtgttcctgatcagcttgaaagccggcggc
gtcggcctcaacctgaccgcggccgataccgtgatccattacgatccgtggtggaatccc
gccgccgaaagccaggccaccgaccgtgcctggcgcatcggccaggataaaccggtattc
gtctacaagctgatcgccaagggcacggtggaagagagcatccagctgctgcagcaaaag
aaagccgacctggcgcaggccatgttgtcgccgcaaggggaggaagcgcagaacgtcggc
ctgacccaggacgacctgcaggcaatctttgcgccgctggctgaataa
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