Collimonas pratensis: CPter91_5099
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Entry
CPter91_5099 CDS
T04306
Name
(GenBank) periplasmic binding s and sugar binding domain of LacI family protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpra03000
]
CPter91_5099
Transcription factors [BR:
cpra03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CPter91_5099
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_Tnp_ISL3
HTH_31
HTH_3
DUF2089
Motif
Other DBs
NCBI-ProteinID:
AMP07387
UniProt:
A0A127QBG7
LinkDB
All DBs
Position
complement(5253565..5254554)
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AA seq
329 aa
AA seq
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MATIKDVARKAGVSYTTVSHVLNQTRPVSHDASTRVLAAAEALAYVPSALARSLRSKTTG
SIGLIIPNNTNPYFSEVARGIEDSCYAAGYSVILCNSDDDPAKQRDYLNVLLTKRCDGLI
VATLAQTDGELLRKMKVPTVLLDRAPKDMGIDLVAVDNAAGGALAAQHLLSLGRRRIACI
GGPADIDISRERIAGLRQTLFVAGVTLPDDMLVYADFTSAGGYLAARSLLASQAPDAIFC
CNDLMAIGALRAAAELGIAVPQTLAVVGFDDIDLAQFVHPTLTSVAQNTRRLGQLTAQCL
LERIATPDRPLQRQTIAPELHVRGSTVAA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatcaaggatgtagcgcgcaaagcgggagtgtcgtacaccacggtgtcgcac
gtcctcaaccagacgcggccggtcagccacgacgccagtacgcgcgtgctggcggccgcg
gaagcgctggcctacgtgccgagcgcgctggcgcgttcgctgcgcagcaagaccacaggc
agtatcggcctgatcattccgaacaacaccaatccgtatttttcggaagtggcgcgcggg
attgaggatagctgctacgcggccggctacagcgtcatcctctgcaattcggacgacgat
ccggccaagcagcgcgattacctcaacgtgctgctgaccaagcgttgcgacggcctgatc
gtggcgaccctggcgcagaccgacggtgaactgttgcgcaagatgaaggtgccgaccgtg
ctgctggaccgggcgcccaaggacatgggcatcgacctggtggcggtcgacaatgctgcc
ggcggcgccttggcggcgcagcatctgctgagcctgggacggcgccgcatcgcctgcatc
ggtggcccggctgatatcgacatttcgcgcgagcggattgccggcttgcgccagaccttg
ttcgtcgccggcgtcacgctgccggacgatatgctggtgtacgccgatttcaccagcgcc
ggcggttacctggcggcgcgcagcctgctggcgtcgcaggctccggatgcgattttctgt
tgtaatgacctgatggcgatcggcgccctgcgcgctgcggcagagcttggcattgcggtg
ccgcagacgctggcggtggtgggtttcgacgatatcgacctggcgcagtttgtccatccg
accttgaccagcgtcgcccagaatacgcgccggctcggccagctcaccgcgcagtgcctg
ctggagcggatcgccaccccggaccggcctttgcagcggcagactatcgctccggaactg
cacgtgcgcggttcgaccgtggcagcctga
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