Collimonas pratensis: CPter91_5219
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Entry
CPter91_5219 CDS
T04306
Name
(GenBank) DEAD/DEAH box helicase family protein
Organism
cpra
Collimonas pratensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AMP07507
UniProt:
A0A127QBU1
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All DBs
Position
complement(5372028..5377943)
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AA seq
1971 aa
AA seq
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MLDPIGGFGRIRDFFISYVETSFRISDPDVSKIRRKLLESYDTLATEPFLEPVLRYTGHP
KLLEDLAMDDNGPLGNLSIAGRRAFVELALSGLFDGDIADSEIKRKSRYAPYQHQISMLE
RGIKPGHPGIVTSGTGSGKTESFMLPILAAIANEAVQWKKPDASFLQNRWWESDDASWRA
MRQGERRPAAMRALILYPMNALVEDQMVRLRKTLDSEEARTVMDERFDGNRVFFAQYTSA
TPVTGYETHPRMADDTDEKKRRSRGLRKLRSALKRAEQDQQAARKHDANAAAEAALSGEK
IPDLTRYIFPSMDGGEMLSRWDIQAAPPDLMVTNASMLGAMLSREVEEKIFDTTRNWLIS
NDDAYFYLVFDELHLIRGSAGTEIAFLIKTLIQRLGLDQPQHRYKLRILASSASLPMIGD
DGEQSRTYLRDLFAPFGTSKTANDPGSTDSTFWKGCVVEGVPSIPIWNLEAIDPAPFVKL
MQIALAGGADFVAKMKFSDELLLAVKSAASALGIAGQSEEDTVKNLAEAAAAAMTSGCRD
GKGVRATRLTEVANRIFADGGPDHELALRGLMLARALPESGLWDKNRAGVALTTPAFRVH
TFIRNIEGLFAAPSPTADGVEFSNLTIERGLSHARPDANTKRGKRLFELLYCEACGDLLI
GGQRGDKTLTATATELLPSSGNLENLPEGAANEYYDSMKLEEFAVFWPRRTPPLLPERDY
DDWQLAHLDPHSGVVFTRLDAEVPDGHVGGHLYRQKENAVRNVKGRVTGPRSAQPFCCPK
CGTDYSRRPVTNRSRSPIRAFRTGVSKASQLVATELFELLLAIGAEPKGICFSDSRQDAA
NQALEIENMHLLDVRREILVATARSYVAKQRAEWISPEEFEKQTTALMNEKKFAEVAAYG
ARYNAQGSEGEKPPAEGRIVPLAKLLQHKEGHGHVGELVAEFVRMGVHPFDKAGRQKFRG
HEWHELFVPAGTNGNDIAYHEELTGADRLNLAGLILSQQYELVDDVIFANTFFALEETGL
AYPCVSDRDIAGKDELDAWLRVFAGAYRIRDNQYFDEDAKKEWVLGFDITNNRVKKVAQK
VFGDTSVVEKLSSVLGRLSAIGHKSGWFDIGNLHLRVAEGGDPYWRCKTCERVHMHYGIR
HCTRCGDPLALGASGKVEDLWQENFLGKRIVRGAKDEVPRFRLRVEELTGQTDNFSDRLR
KFKGIFVDGQSETKKRATEIDMLSVTTTMEVGIDIGSLQSVYQANMPPQRFNYQQRVGRA
GRRGQAFSFVATFCRGRTHDAYYFAHPKAITGDAPPPPFLAINHEPIPLRLLRKSWLRAA
FKMLRQECHQNSKPYPGDLLLPPDIHGEYVTMADYYFDDAAGWPQRLRDALHSTISVRDE
FLQAATFSVDQQTALATHATVEQLMSEINGLKPNEPTGTGFGLARFLAEQGLLPMYGMPT
RVRNLYLGLREDDGKGSDEYEWSTISRDLDLAVFEFAPGSVLVKDKQKHKVIGFTGNLSD
PVKRAGGIAVQAVSDWWESETFVAICDACGSAKHYETLPTTELECDDCREQISIANFAEY
KTPTAFRTDFNPQDSGDVVGRMNQRTVATVLKVGEPIVHRNIVVRRGAGATIMQLNDGVA
NSDEVAQQFRVDEVSDLRLPLPGASKWLKLTRSQAIETSIREKSQASRWELNGNLGMKFG
LISRKKTDAVYLELRKFDSRLNLNHVARKGEFFNIATRAAAVSATQILVQKAALMLDVSA
EEFEALEPRLRGGLPMLQIADSLVNGSGLCKRLGDPDVSGGVPYIAKLLEEILENEIVWP
LQDFLGTDGDGAHAEQCKTSCYRCIQRFGNRRYHGLLDWRLGIAYLRAMIQDNYSAGIDT
NDRNFPEIAEWHEYAHSLAESVVAMRPGTMSYVVLAASKLPCIIARSLAGDELFRTVVVH
PLWRKDESVMSKILGTDWANGLTFTDTFNLERRPLRTLAEMHNKQANIESK
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatccaataggcggctttggtcgcatcagagatttttttatctcctacgtcgag
actagtttccgtatttctgaccctgacgtaagcaagatacgtcgcaaattacttgaatct
tacgatactttggctacggagccgtttctcgaaccagtgctgcggtacacggggcatcct
aagttgctagaggatttagcaatggatgacaatggccctctcgggaatctatcaattgcc
ggaagacgggcattcgtcgaactagctttgtcaggattatttgatggagacattgctgat
tcagagattaaacgaaaatcgcgttacgctccatatcaacatcagatatctatgcttgag
cgcgggattaagccaggtcatcctggtatcgtcacttctggcacgggttctggaaagacc
gaaagttttatgttgcccattctagcggcaatcgcgaatgaggcagtgcagtggaaaaag
ccggatgcatcatttttacaaaaccggtggtgggaaagcgatgatgcgtcttggcgagct
atgcgccaaggtgagaggcgtccggcggcaatgcgagcattgattctctatccaatgaat
gcattggttgaggatcaaatggtccgattgcgaaaaacgcttgattcagaagaagcgcga
acggtcatggacgaacgatttgacggcaatcgcgtctttttcgcgcaatataccagcgcg
actccggtcactggttatgagactcacccacggatggccgatgacacggacgagaaaaag
cgccgctctcgagggctacgcaagctgcgctccgccctcaagcgggccgagcaagatcaa
caggccgcgcgtaagcatgatgcaaacgctgctgccgaagcagctttatctggagaaaaa
ataccagacttaactcgctacatttttccctccatggatggcggcgaaatgctatctcgg
tgggacatccaagctgcacctcccgatctaatggtaaccaatgcttcgatgttgggagca
atgttgtccagggaagtagaggaaaagatctttgacaccactagaaattggcttatctcg
aatgacgacgcatatttctatttggtatttgatgagcttcacctaattcgaggttcggct
ggtacagagattgcgtttctgatcaagacattaattcaacgtcttggcttagatcagccg
cagcatcgatataagttacgtattctcgcttcatctgcgtcgttgccaatgattggtgac
gacggcgagcaatctcgtacctacttgcgagatctatttgcgccatttggaaccagtaag
acagcaaacgatcctggctcaacggattcgactttttggaaaggctgtgttgttgaaggt
gttccaagtattccaatatggaaccttgaggccatcgatccggctccgttcgttaagcta
atgcagatagcgcttgctggcggtgcggactttgttgctaagatgaagttttctgatgag
ctacttcttgccgtgaaatctgcggcgtctgcactagggattgctggccaatcagaagaa
gacactgtaaaaaatctcgcagaggcggctgcagctgctatgacgagtggatgtagagat
ggtaagggggttcgcgcgacacgtctcactgaagtagctaatcgaatatttgcagacggc
ggccctgatcatgaactggccctgcgaggtttaatgctcgctcgggctttgccggaatcg
gggttatgggataagaatcgagctggagtcgcacttaccactccagcatttagagttcat
acgttcattcgaaatatcgagggtctgtttgctgctcccagcccaaccgcagacggagtc
gaatttagcaacctcactattgagcgcgggctttctcatgcccgtccagacgctaacaca
aagcgcgggaagcgcttgttcgaacttttgtattgcgaggcatgcggagacttgttgatt
ggtggccagcggggggataaaactttaactgcgacggcgactgaattgctcccatcttct
ggcaaccttgagaatcttcctgaaggtgcagctaatgaatactatgattcaatgaagcta
gaagagtttgcagtattttggccacgtaggaccccacccttattacctgagcgcgactac
gatgactggcagctggcccatttggatccacattcaggagtagtattcacccgactcgat
gccgaggtaccagacgggcatgtaggtggccatttgtaccgtcagaaagagaatgcagtt
agaaatgtaaaaggccgtgttactggtccgcgttctgcacagcctttctgctgccctaaa
tgcggcactgattattcaaggcggccagtcactaaccgatcacgatcacctattcgcgct
tttcgcaccggtgttagtaaagcatctcagctagtggcgaccgagctcttcgaactgttg
cttgctataggtgcggaacctaaggggatctgtttctctgacagtcggcaagatgccgcg
aatcaagcgctcgagattgaaaacatgcatttacttgacgtgcgtcgcgagatcctcgtg
gccacggcccggtcttatgtagctaagcaacgcgctgagtggattagcccagaggaattt
gaaaaacaaactacggcgctaatgaatgaaaaaaaattcgctgaagttgcggcatatgga
gctcgctacaatgcgcaagggtcggagggggaaaagcctcccgctgagggacgtattgtt
ccgctcgcaaaacttttacaacataaggaaggccatggccatgttggtgaattggttgct
gagttcgttcgtatgggcgtccatccgtttgacaaagctgggcggcagaaatttcgcggc
cacgaatggcatgaattgttcgtgcctgcagggacgaatggcaacgatatagcgtaccac
gaggaactgaccggagcggaccgtttaaatttggccggattgattttgagtcagcaatat
gagttggtcgatgatgtaatttttgcgaacactttttttgcgttggaagaaactgggctc
gcgtatccatgtgtatctgatcgcgatattgctgggaaggacgaacttgacgcctggtta
cgcgtattcgctggcgcgtatcgaattcgcgacaatcagtactttgatgaggatgccaag
aaagaatgggttctaggctttgacatcactaacaatcgagttaaaaaggttgcgcagaag
gtattcggggacacttccgttgttgagaaattgagctcagtcctcggccgcttatccgcg
attggacataaaagcggctggtttgatatcggcaatctgcatttgcgtgttgctgaaggg
ggagatccatattggcgctgtaagacttgtgaacgagtccatatgcattatgggatacgt
cattgcacacgctgtggagatccattggccctcggagcaagtggtaaagttgaagatctg
tggcaagagaattttcttggcaagcgaattgtgcgaggagccaaggatgaggtgccgcga
ttccgtctccgcgttgaagagcttaccggtcagacagataacttttccgataggctgaga
aaatttaagggaatttttgtcgatggacagagtgagacgaagaagcgagctactgaaatc
gacatgctatcagttacaacgactatggaggttggtattgatattggctcgctgcaaagt
gtgtaccaggccaatatgccgccacagcgattcaactaccaacaacgtgttggtcgagcc
gggcgacgcgggcaagctttttctttcgtagcgactttttgtcgcggacgaacccacgac
gcatactattttgcacaccccaaggcgattactggagatgctccacctccgccatttctt
gcaataaatcacgagccgattccgctgagactattgcgcaaatcttggctgcgcgcggca
tttaaaatgctgcggcaggagtgccaccaaaacagcaagccatatcctggtgatctgttg
ctgcctcctgatattcatggcgagtacgttactatggcggactattatttcgacgatgcg
gcgggttggcctcaacgccttcgagatgcgctgcactcaactatatctgtgcgagatgaa
tttttgcaggctgcaacgttcagcgtcgatcagcaaacagcgctagcgacgcatgcaact
gtggagcagctgatgtcggaaattaatggtcttaaaccaaatgaaccaaccggtaccgga
ttcgggttggcgcgctttctcgccgagcagggactactgccgatgtatggcatgccgacc
cgggttcgaaatctctacttgggccttcgagaagatgacggtaaaggcagcgacgaatat
gaatggtcgacgataagccgtgatttggacctggccgtcttcgagtttgctcccggctct
gtgctcgttaaggataaacaaaagcataaggtgataggttttaccggaaatctttccgat
ccggtgaagcgcgcgggaggtatcgcggtccaagcggtatcagactggtgggagtctgaa
acatttgtcgccatatgtgatgcctgtggctctgcgaagcactatgaaacattgccgaca
acagagcttgagtgcgatgactgtcgtgaacaaatttcgatagcgaacttcgcagaatat
aaaacgccgacggctttccggacagattttaatcctcaagacagcggtgatgtagtcggg
cgcatgaatcaacgtactgttgccacagtactgaaagtaggtgagccaattgtgcatcga
aacattgttgtgcggcgcggggccggagccacaattatgcaacttaatgatggggtagct
aattcagacgaggttgctcagcaatttagagtcgatgaggtgtctgatttacgattgcct
ttgccaggagcatctaaatggctcaaattgacgcgatcacaagcgatcgaaacgagcatt
cgtgaaaaatctcaggcgagtcgatgggagcttaatggaaatttgggtatgaagttcgga
ttaatctctcgaaaaaaaacggatgctgtttatttagaattgagaaaatttgacagccgt
ttaaatctgaatcatgttgctcgtaaaggggaattcttcaatatagcaactcgtgccgcc
gctgttagtgccacccaaattctagtgcaaaaagcagcactcatgcttgacgtatctgct
gaggaatttgaggcactcgagcctcgccttcgcggtggtttgcctatgctgcagatagca
gactcattagtcaacggatctggtttgtgcaaacgcctcggtgatccggacgtgtcgggg
ggcgtgccatatattgccaagttgcttgaggaaatcttggaaaatgaaattgtatggcct
ttacaagatttccttggcacagatggcgacggtgcgcatgcggagcaatgtaagacgtct
tgctatcgttgtattcaacgatttggcaatcgtcgatatcatgggctgcttgattggcgc
ctcggaattgcctacttgagggctatgattcaggataactattcagctggcattgataca
aatgacaggaatttcccagaaatagctgaatggcatgaatatgcgcatagtttggcagag
tcagttgttgcaatgcgtccgggaacgatgagctacgttgttctcgcagcttcaaaatta
ccctgcatcattgcacggtctctggcaggagatgagttgttccgcaccgtcgtggttcat
cctctatggaggaaagacgaatcagtgatgtccaagatcttgggtactgattgggcgaat
gggctcacttttaccgacaccttcaacttagaaagacggcctctgcgaactctcgcggag
atgcataacaagcaggcaaatatagaaagcaaataa
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