Collimonas pratensis: CPter91_5238
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Entry
CPter91_5238 CDS
T04306
Name
(GenBank) pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpra03009
]
CPter91_5238
Enzymes [BR:
cpra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CPter91_5238
Ribosome biogenesis [BR:
cpra03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CPter91_5238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AMP07526
UniProt:
A0A127QC10
LinkDB
All DBs
Position
5394897..5395613
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AA seq
238 aa
AA seq
DB search
MPKLTLDRILQSQGFGSRKYCRELIEDGEVAINGVVVTDYKSVPDTDGLVFTLFEEEWTY
REHVYIVLNKPSDIECSRKPSHHPGVLSILPEQFSWRDVQPVGRLDHDTTGLLLMSDDGS
FIHAQSSPKRHVPKLYVATTHEPVTEELVQSLLAGVKLHDEPQTLAAVSCRMLGTHEIEI
VLEQGKYHQVKRMLVAAGNHCTALRRTAIGGLTLEALELELGEWCYLEPEHLALLVPS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaactgaccttagaccggatcctgcaatcgcagggtttcggcagccgaaaatat
tgccgtgagttaattgaagatggcgaagtcgccatcaacggcgtcgtcgtgaccgattac
aaatccgtgccggacaccgacggcctggtgttcaccctgttcgaagaagaatggacttac
cgcgagcatgtctacatcgtgctcaacaaacccagcgacatcgagtgctcgcgcaagccc
agccaccatcctggagtgctgagcatcttgccggaacagttcagctggcgcgacgtgcag
ccggtcggccgcctcgaccacgacaccacaggcctgctgctgatgtcggacgacggcagc
ttcatccacgcccagtcctcgcccaagcgccacgtgcccaagctgtacgttgccactacg
catgagccggtgaccgaagagctggtgcaaagcctgctggccggggtcaagctgcatgac
gagccgcaaaccctggccgccgtcagctgccgcatgctgggcacacatgaaatcgagatc
gtgctggaacagggcaaataccatcaggtcaagcgcatgctggtggccgccggcaaccat
tgcaccgccttgcgccgcaccgccatcggcggcctgacgctggaggcgctggaactcgaa
ttgggagaatggtgctacctggagccggaacacctggccctgctagtgcctagctaa
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