Collimonas pratensis: CPter91_5272
Help
Entry
CPter91_5272 CDS
T04306
Symbol
rafA
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
cpra
Collimonas pratensis
Pathway
cpra00052
Galactose metabolism
cpra00561
Glycerolipid metabolism
cpra00600
Sphingolipid metabolism
cpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CPter91_5272 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
CPter91_5272 (rafA)
00600 Sphingolipid metabolism
CPter91_5272 (rafA)
Enzymes [BR:
cpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
CPter91_5272 (rafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Glyco_hydro_31_2nd
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
AMP07558
UniProt:
A0A127QBX3
LinkDB
All DBs
Position
complement(5430202..5432343)
Genome browser
AA seq
713 aa
AA seq
DB search
MTESKLMHLSGRDLSMVLEQVAGAPPAWRHFGAKCHVAGDTWPAASARPHPPTLLDNDPA
LSVLPTHGFGWFNQPALAGSRPCSIGDLDWAQSFVLDQVELRQHSLQLGLSDRTAGLGLV
VSYTVDPDSDVVSIWSELENRGATPFRLDWLAAACVPLPPEADQVLGFAGRWTLEFQEMR
ETLGIATWRRDSRRGRTSHDAFPGVIVGNGLADDTGCTFGAHLGWSGNHTVLIEPLNDGR
RQLQIGEWLAAGEVMLAPGERYRTPTAYLSFSALGLNGLSANFHRFVRQRLLSWPGQQMA
PRPVHLNTWEAVYCDHDLDGLKALASAGAEVGVERFVLDDGWFQHRDNDRAGLGDWWPDA
RKYPQGLKPLIDHVRKLGMQFGLWVEPEMINPDSDLFRAHPDWVLQLEGRAMVTGRNQLV
LDFANAQVTEYIFGKLSGLLRAYPVAYLKWDMNRDLAAAGHHGRAAYRRQVEALYRLLDK
LRSAHPAVEIESCASGGGRADYGMLAHTHRVWTSDCNDALTRIDIQRGFLRFFPPEVMGA
HIGPAASHTTGRRHDLAFRAAVAMFGHLGLELDVRTLDAAEKAELCHWISLYKEWRGLAH
SGNLRQGGADGALSWLHVTAIDQSAALCAVYRRREDVTRYLAPLRLAGLDPSRNYRLRAF
SMPHAPHYTRQTELLQALVDGELTLSGATLRDFGLPLPPLPPESALVIGISAM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcaaaattgatgcacctgagcggccgcgacttgagcatggtgctcgaacag
gtcgccggtgcgccccctgcctggcgccatttcggcgctaagtgccatgtcgctggcgac
acctggccggcggcgagcgcgcggccgcatccgccgacgctgctggataacgatccggcg
ctgagcgtgctgccaacccatggttttggctggttcaatcagccggcattggcggggagc
cggccttgcagcatcggcgatctcgactgggcgcagagttttgtcctcgaccaggtggaa
ctaagacagcattctttacaacttggcttgagcgaccgcaccgccgggctgggtctggtc
gtcagttacacggtggatcccgatagcgatgtcgtcagcatctggagcgaactggaaaat
cgcggcgccacgccgtttcggcttgactggctggctgccgcctgcgtgccgctgccgccc
gaggcagaccaggtgctgggctttgccgggcgctggaccctggagttccaggaaatgcgc
gagaccttaggaattgccacctggcgccgcgacagccggcggggacgtacttcccacgat
gccttcccgggcgtgattgtcggcaacggcctggccgacgataccggttgtacgttcggt
gcgcatctgggctggagcggcaaccacaccgtgcttatcgaaccgttgaacgatggccgc
cgccagctgcagataggcgaatggctggccgcgggagaggtaatgctcgctcctggcgag
cgctatcgcacgccgaccgcctatctttctttcagcgcactgggattgaatggcctgagc
gccaactttcatcgcttcgtgcggcaacgcctgctgagctggccggggcagcagatggct
cccaggccggtgcatctgaacacctgggaagccgtatattgcgatcacgacctggatggc
ttgaaggcgctggccagtgccggagcggaagtcggggtcgaacgtttcgtcctggatgac
ggctggtttcagcatcgcgataacgatagggccggactgggcgactggtggccggatgca
cgcaaatatccgcaaggattgaagccgctcatcgatcatgtgcgcaagctgggcatgcag
ttcggcttgtgggttgaaccggaaatgatcaatcccgacagcgacctgttccgcgcccat
cctgattgggtgctgcagctggagggccgcgcgatggtgaccggccgcaaccagctggta
cttgacttcgccaatgcgcaagtgacggaatacattttcggcaagctgagcggcctgctg
cgggcctatccggtcgcctatctgaaatgggacatgaatcgtgatctggctgccgccgga
caccatggtcgcgccgcctaccgccgccaggtggaagcgctttaccgcttgctggacaag
ctgcgcagcgcccatccggcggttgaaattgaaagctgcgcctccggcggcggacgcgcc
gattacggcatgctggcgcacacgcacagggtctggaccagcgactgcaatgacgcgctg
acgcgcatcgacatccagcgcggcttcctgcgtttcttcccgcccgaggtgatgggagcg
cacataggaccagcggcttcccacaccacgggccggcggcatgacctggcgtttcgcgca
gcggtcgccatgtttggccatctcggactggaactggatgtgaggacgctggatgcggct
gaaaaagccgagctttgccactggatttctctgtacaaggaatggcgcggcctggcgcat
agcggcaacttgcggcaaggcggcgcagacggcgccttgtcgtggctgcatgttaccgct
atcgatcagagtgcagccctgtgcgccgtttatcggcgccgcgaagacgtgacgcgctac
ctggcgccgctgcgtctcgccggcctcgatccctcccgcaactaccggctacgcgcattt
tccatgccgcatgcgccgcattacacacgccagaccgaactcttgcaggcgctggtggat
ggcgagctgaccttgtccggcgctacattgcgtgatttcggattgccgctgccgccgctg
ccgccggagtcggcgctagtcatcggcatcagcgcgatgtaa
DBGET
integrated database retrieval system
