Collimonas pratensis: CPter91_5446
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Entry
CPter91_5446 CDS
T04306
Name
(GenBank) YXWGXW repeat family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_5446
Transporters [BR:
cpra02000
]
Other transporters
Pores ion channels [TC:
1
]
CPter91_5446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
WXXGXW
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
AMP07729
UniProt:
A0A127QCD5
LinkDB
All DBs
Position
complement(5626351..5627115)
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AA seq
254 aa
AA seq
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MQTYIRKILFLSAAATGLLGAASNVLAQPAPYQPAPYQLQIQADPGWRRDAPQVAVERDG
WQRFEAPPPRYEAVPPPARSGYAWQRGYWERRHRDEPRWVKGYWVAVQPVAVVAPPPPPL
PPAPVQQRPKIERISADALFRFDQSSLGQMLPAGRAQLAALAKRLAASRYARVEVRGYTD
RLGSDSYNLNLSIRRANTVKDVLVSYGIPAARVKAVGLGAQDPVTQCRDGLQQEALIRCL
LPNRRVEIATFAMP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacttatatccggaaaatcctgtttctgtcggctgccgccacaggccttcttggc
gcggccagcaacgtgctggcgcagccggccccatatcagccggctccctatcagttgcaa
atccaggccgacccaggctggcgccgcgacgcaccgcaagtcgctgtcgagcgtgatggc
tggcagcgcttcgaggcgccgccgccgcgctacgaagctgtgccgccgccagcgcgttcc
ggctatgcctggcagcgcggttattgggaacgccgccatcgtgacgagccgaggtgggtc
aagggctactgggtggcagtgcagccggtagcggtggttgcgcctccgccacccccgcta
ccgccggcaccggtgcagcagcggccaaaaatagaaaggatttcggccgatgccctgttc
cgcttcgaccagtccagcctgggccagatgctgccggcaggacgggcgcagctcgctgcc
cttgccaagcgcctggcagccagccgctatgcgcgggtggaggtgcgcggctataccgac
cgtctcggcagcgacagctacaacctgaacctgtcgatccggcgcgccaatacggtcaag
gatgtgctggtgagctacggcattccggccgcgcgtgtcaaagccgtcggcctgggcgcg
caggatccggtgacgcaatgtcgcgacggcctgcagcaagaggcactgatccgctgtctg
ctgcctaaccgccgcgtcgagattgcgacttttgcgatgccataa
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