Collimonas pratensis: CPter91_5451
Help
Entry
CPter91_5451 CDS
T04306
Name
(GenBank) binding--dependent transport system inner membrane component family protein
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
cpra
Collimonas pratensis
Pathway
cpra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPter91_5451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_5451
Transporters [BR:
cpra02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CPter91_5451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
DUF6126
DUF4064
Motif
Other DBs
NCBI-ProteinID:
AMP07734
LinkDB
All DBs
Position
complement(5632743..5634002)
Genome browser
AA seq
419 aa
AA seq
DB search
MSMAPPAAPQNSQLKRELRQALFRKRAAALALIAPLAIFLLLTFLVPIAMLLKRAVENPE
IATTLPHTVAALSNWDRKSSPPDAAYAGLATDLLQAREDSSAGSLARRLNSEISGARSII
MKTARALPLLDADGKPLPPAQIKQALIDIDEQWSQLPYWQVIAKNGAPYSPYYVLAALDL
KQDAFGHIEKADPDASVYQKIFGRTFWMGLVATLACLVLGYPLAYWLSTMSERRANLFMI
LVLIPFWTSILVRVAAWIVLLQSEGLVNKALMATGLTQAPLELLFNRIGVYIAMTHILLP
FMILPLYSVMKAIPPTYMRAAVSLGSHPFAAFWRVYVPQTYPGIGAGALLVFILSVGYYI
TPALLGGPNEQMVSYYIAYFTNVTINWGMACALGALLFAATLVLYGVYRRFTKNDVAMG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcgccgccggcagcgccgcagaattcgcagctcaagcgcgaattgcggcag
gccctgtttcgcaagcgcgccgccgcactggccttgatcgcaccgctggcgattttcctg
ctgctgactttcctggtgccgatcgccatgctgctcaagcgcgccgtggaaaacccggaa
atcgcgacgacgctgccgcataccgtcgccgccctgagcaattgggatcgcaagagcagt
ccaccggatgccgcctatgccggactggcgaccgatctgctgcaggcgcgggaagacagc
tctgccggttcgctggcgcgccgtctgaattccgaaatctccggcgcccgttccatcatc
atgaaaaccgcgcgcgccttgcctttgctggatgccgacggcaagccgctgccgccggcg
cagatcaagcaggcgctgatcgatatcgatgagcagtggagtcaactgccgtactggcag
gtgatcgccaagaacggcgcgccatattctccctactatgtgctggcggcgctggacctg
aagcaagatgctttcggccatatcgaaaaagccgacccggacgcctcggtatatcaaaag
attttcggccgcaccttctggatgggactggttgcgactctggcttgcctggtgctcggc
tatccgctggcctactggctctcgaccatgtcggaacggcgcgccaacctgttcatgatc
ctggtgctgattccgttctggacttcgatcctggtgcgggtggcggcctggatcgtgctg
ctgcagtcggaaggactggtcaacaaagcattgatggcgaccggcctgacccaggcgccg
ctggaactgctgttcaaccgcattggcgtctacatcgccatgacgcacatcctgctgccg
ttcatgatcctgccgctgtacagcgtgatgaaggcgattccgccgacctacatgcgggcc
gcggtctcgctcggcagccatccgttcgccgccttctggcgtgtgtatgtgccgcagacc
tatcctggcatcggcgccggcgccttgctggtgttcatactctcggtcggttactacatc
acgccggccttgctgggcggaccgaacgaacagatggtcagctattacatcgcctatttc
accaatgtgaccatcaactggggcatggcttgcgcgctgggagcattgctgtttgccgcg
acgctggtgctgtacggcgtttaccggcgctttaccaaaaacgatgtggcgatgggctaa
DBGET
integrated database retrieval system
