Collimonas pratensis: CPter91_5452
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Entry
CPter91_5452 CDS
T04306
Name
(GenBank) bacterial extracellular solute-binding family protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cpra
Collimonas pratensis
Pathway
cpra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPter91_5452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_5452
Transporters [BR:
cpra02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CPter91_5452
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AMP07735
UniProt:
A0A127QD17
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All DBs
Position
complement(5634135..5635175)
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AA seq
346 aa
AA seq
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MKSIFKPVFTSIVLSLAAIGMAQAAALTVVNFGGANGAAQKVAYIDPYAKTSGDKITVVE
FNGELAKVKAMVEAKKVSWDVVEVDAGDIGRACEEGLLEKIDFSKIGNKADFNPAAIHEC
GVGAFVWSTVLAYDADKLKTAPKTWADFWDTKKFPGKRALKKGAENNLEFALMADGVAPK
DVYKLLGTKAGVDRAFKKLDELKPNIQWWEAGAQPPQFLVAGDVVMSSAFNGRIDAAQRE
GKNLKVSWAGSIYTLDFWVIPKGSPNKADAEKFVAFASKPDSQKAYASNISYGPVNNQAL
KLLDPKVLANLPTSPTNAKDALQLSLSFWTDHGEELEQRFTAWAAK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccatattcaaaccggtttttaccagcatcgtattatcgctggcggccatcggc
atggcgcaagccgctgccctgacggtcgtcaatttcggcggcgccaacggtgctgcgcag
aaggtcgcctatatcgatccttacgccaagacgagcggcgacaagatcacggtggtcgaa
ttcaacggcgagctggccaaggtcaaggccatggtcgaagccaagaaagtcagctgggat
gtggtcgaagtcgatgccggcgatatcggccgcgcctgcgaagaaggtttgctggagaag
atcgacttcagcaagatcggcaacaaggcagatttcaatcctgccgccatccatgaatgc
ggcgtcggcgccttcgtctggtctactgtgctggcttatgatgcggataaactgaaaacg
gcgccgaagacctgggccgatttctgggacaccaagaaatttcccggcaagcgtgccttg
aagaagggcgccgagaacaatctggagtttgcgctgatggcggacggcgtcgcgccgaaa
gacgtctacaagctgctaggcaccaaggccggcgttgaccgcgctttcaagaagctggat
gagttgaaaccgaatatccagtggtgggaagccggcgcgcagccaccgcagttcctggtg
gcgggcgacgtcgtgatgtcgagcgccttcaatggccgcatcgatgctgctcaacgtgaa
ggcaagaatctcaaggtcagctgggcaggcagtatctacacgctggatttctgggtgatt
ccaaagggttcgccgaacaaggccgacgctgagaaattcgtcgccttcgccagcaagcca
gattcgcaaaaggcctacgccagcaatatttcctacggcccggtgaacaaccaggcgctc
aagctgctggatccgaaagtgctggccaatctgccgacctcgccgaccaacgccaaagat
gcgctgcagctgagcttgtcgttctggactgatcatggcgaagaactggaacagcgcttc
acggcctgggctgccaagtaa
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