Collimonas pratensis: CPter91_5453
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Entry
CPter91_5453 CDS
T04306
Name
(GenBank) polyamine ABC transporter, ATP-binding family protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
cpra
Collimonas pratensis
Pathway
cpra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPter91_5453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_5453
Transporters [BR:
cpra02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CPter91_5453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_25
SMC_N
nSTAND_NTPase5
nSTAND3
AAA_22
TOBE
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AMP07736
UniProt:
A0A127QCL9
LinkDB
All DBs
Position
complement(5635225..5636367)
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AA seq
380 aa
AA seq
DB search
MKQENIAPHLATPAADSRPATQDTLVQFSGVKKTYDGENLVVKNLNLDIQRGEFLTLLGP
SGSGKTTCLMMLAGFEFPTGGEIRLDGQLLNKVPPHKRNIGMVFQNYALFPHMTVAQNVA
YPLRVRNISGSERADKVKKALDMVQMGKFGDRYPAQLSGGQQQRIALARALVFDPKLVLM
DEPLGALDKQLREHMQLELKALHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGIIQQLAV
VDRLYEYPENLFVAGFIGDNNRFHGVLNAADGGNGSVRLPHGGVLHGVNANQAGIGQAVV
ACIRPERIHLQPLASATENAFPVNVSSLIYFGDHVRVRCAIPQQEDCFVKLSLNDPALTG
LQEGTVVALDIDPKHLRIFL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaagaaaatatcgcccctcaccttgctaccccggcagccgacagccggcccgct
acgcaagacaccctggtgcagttctccggcgtcaagaaaacctatgacggcgaaaacctg
gtggtcaagaacctcaacctggatatccagcgcggcgagttcctgaccctgctggggccg
tccggctccggcaagaccacttgcctgatgatgctggccggcttcgagtttcccaccggc
ggcgaaattcgcctggatgggcaattgctgaacaaggtgccgccgcacaagcgcaatatc
ggcatggtgttccagaactacgcactgtttccgcacatgaccgtggcgcagaacgtggcc
tatccgctgcgagtgcgcaatatcagcggcagcgagcgcgccgacaaggtcaagaaagcg
ctcgacatggtgcagatgggcaaattcggcgaccgctatccggcccagctgtccggcggc
cagcagcagcgcattgcgctggcgcgggcgctggtgttcgatcccaagctggtgctgatg
gatgagccgctgggggctctcgacaagcagttgcgcgagcacatgcagctggaactgaaa
gccctgcacaagcggctcggcgttaccttcgtctacgtcactcacgaccagagcgaagca
ctcaccatgtctgatcgcgtggccgtgttcgaccagggcatcatccagcaactggccgtg
gtcgaccgtctttacgagtatccggaaaatctgttcgtggccggcttcatcggcgacaac
aaccgcttccacggcgtgctgaacgcggccgatggcggtaatggcagcgtgcgcttgccg
catggcggcgtgctgcacggcgtcaacgccaaccaggccggaatcggccaggcggtggtg
gcctgcatccggcccgagcgcatccatttgcagccgctcgccagcgctaccgagaatgct
tttccggtgaatgtcagcagcctgatctatttcggcgatcacgtgcgggtgcgctgcgcg
attccgcagcaggaagactgcttcgtcaaactgtcgctgaacgatccggcgctgacgggg
ctgcaagaaggtacggtagttgcattggacatagatcccaagcacctgcgtattttcctt
taa
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