Corynebacterium provencense: Csp1_06520
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Entry
Csp1_06520 CDS
T06939
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpre
Corynebacterium provencense
Pathway
cpre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Csp1_06520 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpre03021
]
Csp1_06520 (rpoA)
03400 DNA repair and recombination proteins [BR:
cpre03400
]
Csp1_06520 (rpoA)
Enzymes [BR:
cpre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Csp1_06520 (rpoA)
Transcription machinery [BR:
cpre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Csp1_06520 (rpoA)
DNA repair and recombination proteins [BR:
cpre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Csp1_06520 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AWT25464
UniProt:
A0A2Z3YSB4
LinkDB
All DBs
Position
741975..742988
Genome browser
AA seq
337 aa
AA seq
DB search
MLISQRPQLTEEYISPSRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIEGVL
HEFTTIPGVKEDVSDIILNIKSLVLSSDSEEPVTMYIRKEGVGTVTGADVVVPAGVEVHN
PDLHIATLNEQGKLDIELVVERGRGYVPAAPTTGEIGRIPVDQIYSPVLKVSYKVEATRV
EQRTDFDKLVIDVETKNSITARDAMASAGGTLVELFGLARELNTEAEGIEIGPSPQETEH
IAAYSLPIEDLDFSVRSYNCLKREDIHTVGELASRTESDLLDIRNFGQKSINEVKVKLAE
LGLGLKDAPEGFDINDIEGYDPESGEFLDTEGEDIAE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcccagcgcccccagctcaccgaggagtacatcagcccgtcgcgttccagg
ttcgtcatcgaacctctggagcccggcttcggctacaccctcggcaactcgctgcgccgt
accctgctgtcgtccatcccgggcgctgcggtgacctccatccggatcgagggtgtgctc
cacgagttcaccaccatcccgggtgtcaaggaggatgtctccgacatcatcctgaacatc
aagtccctggtcctgtcctcggattctgaagagccggtcaccatgtacatccgcaaggaa
ggcgtcggtaccgtcaccggtgctgacgtggtcgttcccgccggtgtggaggtccacaac
ccggacctgcacatcgccaccctgaacgagcagggcaagctggacatcgagctcgtcgtc
gagcgcggtcgcggctacgtcccggccgccccgacgacgggggagatcggcaggatccct
gtcgaccagatctactccccggtgctcaaggtcagctacaaggtcgaggccacccgtgtc
gaacagcgcacggacttcgacaagctggtcatcgacgtcgagacgaagaactccatcacc
gcccgggacgccatggcgtccgccggcggaaccctggtggagctgttcggcctggcgcgc
gagctgaacaccgaggctgaaggtatcgagatcggcccgtccccgcaggagacggagcac
atcgccgcctacagcctgcccatcgaggacctcgacttctccgtccgctcgtacaactgc
ctcaagcgtgaggacattcacacggtcggtgagcttgccagccgtaccgagtccgatctg
ctggacatccggaacttcggtcagaagtccatcaacgaggtcaaggtcaagctcgccgag
ctgggcctgggtctcaaggacgcgccggagggcttcgacatcaacgatatcgagggctac
gacccggagtccggtgagttcctggacaccgagggcgaggacatcgccgaatag
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