Corynebacterium provencense: Csp1_10160
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Entry
Csp1_10160 CDS
T06939
Symbol
rapA_1
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
cpre
Corynebacterium provencense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
DUF5753
CNDH2_M
Motif
Other DBs
NCBI-ProteinID:
AWT25822
UniProt:
A0A2Z3YN47
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Position
1151106..1154510
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AA seq
1134 aa
AA seq
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MHLLWLTDRGLQLWVEQVPGHAVVVDPSALGEGDLPEPLLDLVGSRVLRRREGLKVVTPK
GKLKTLPLYTQSWIPEQSLGVLARLSHYVDDAGVVGPRGKGPAGTTGSADSGVTPGLSPE
VVWAVHLYRFLCEIVAAGRVMVRLQFSDSQWFPVWCISTSGRHNRILREFRDTAPAVLTV
NGGDDVVTRMADELVHWMCVSLLQDRLPRAGVEPGNHFVSALVSGQADSRLTPVVADGLA
EWRRSAREATTRTVLVLQEPLTGETDGGTTGADTAEPSVGETVPAERATADRRAGLPDPD
SRCWRLEVRLSVDDAPAERLPATSVDEPTRRALRRALDAAYRAWPGLRDAGTAVEGWMRT
GVWFPDPDVLTGDRDEDRALAFALTTADVEELLTEGVPALAASGTEVLVPRGWSTVRPAV
RVRVTPVGTGPSEGRMGMDQVLSFDWSISVDGEELSQAQKNELLTTAGSTVRIRGRFVRL
DRAALSRARNYFRSMTDAEDSTGTRTTTAEKSGPGADRSEQEQWENSRTTLTVRELVAAQ
MRAGDQPWDDDPDFTLEAQDWIGRIFGGSTHGEGKEGKESTGLAGTAFSPPERVTVPSTV
TVPLRDHQQRGLNWLVWMYRHRLGAVLADDMGLGKTLQVLSLLAWESVNGEKTGPTLVVA
PTSVLDTWRGEVERHVPSLKVLVDHGSAKVAEKDFPEAAGSADIVLTSYGTVARNAGRYA
GVHWGRVVADEAQNIKNPGTAQSRAVRSLEADHRLALSGTPVENRLSELHTLMDFCNPGL
LGSAKAFHNAIGSQIERDRNPRDVERLHRLVDPFILRREKTDESLGLGLPGKHEYTDLVP
LTAEQAALYQAYTQDIRERLQSSSTERRSGLVLAALTHFKEICNHPAHFSGDGSGVKRDG
VHRSGKVERLWQIVGDALAGHRRVLVFTQFPSFGRMLAPEMEKDFGIEVPVLHGGLSRKA
RTTLVDRFQESDGPEVMILSTRAGGTGITLTRASVVVHIDRWWNPAVEDQATDRAYRIGQ
GQEVSVHKLIATGTLDERINDILGAKRDLAGDVVSAGESWLTRMDNDALQDLWRLENSTS
DRRFGTGGPDGEEELQKAAELAELQKAEFREDLARRYPVKNVSDNEGDSDDGQQ
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctgttgtggctgaccgaccggggactgcagctctgggtggagcaggtccccggt
cacgccgtggtcgtcgacccgtcggcgctgggggagggggatctcccggaacccttgctg
gacctggtggggagcagggtgctgcggcgcagagaagggctgaaggtcgtcaccccgaaa
ggaaagctgaagaccctgccgttgtacacgcagtcgtggataccggagcagtcactcggt
gtgctggcgcggttgtcacactacgtcgacgatgccggtgtcgtcgggccccgggggaaa
ggcccggccggcactacgggctctgcggattccggtgtcactccgggactgagccccgag
gtcgtgtgggcggtgcacctttaccgttttctctgcgagatcgtggcagcaggcagggtg
atggtgcgtctgcagttctccgacagtcagtggtttcctgtgtggtgcatctccaccagc
gggcggcacaaccggatcctccgggagttccgtgacacggcccctgctgtgctgacggtg
aacggtggtgacgacgtggtgacacgtatggccgacgaactggtgcactggatgtgtgtc
tcccttctgcaggaccggctgccgcgggccggcgtcgagcccgggaaccacttcgtctcc
gccctggtgtcggggcaggcggactcccgcctcaccccggtcgtcgccgacggcctggcg
gagtggcgccgctcggccagggaagccaccacccgcaccgtcctggttctccaggaaccg
ctgaccggggagaccgacggcggcaccacgggagcggacaccgctgaaccgtcagtcggg
gagacggtccccgcggaacgcgcaacggcagaccgcagggccgggctgccggacccggac
tcacgctgctggcgtctggaggtcagactctctgtcgacgacgcgcccgccgagcggctg
ccggccacctccgtggacgaacccaccaggcgggcactgcggagggccctggatgcggcg
taccgtgcctggcccggtctgagggacgccgggaccgccgtcgaagggtggatgcggacc
ggggtctggtttcccgaccccgatgttctcaccggtgaccgtgacgaggaccgggcgctg
gctttcgctctcacgaccgcggatgtcgaggaactgctgaccgagggtgtgccggcactt
gccgcgtccggcacggaggttctggtgcccaggggatggtccaccgtcagacccgcagtc
agagtgcgtgtgacaccggtcggtacgggcccgtcggagggcaggatgggaatggaccag
gttctctccttcgactggagtatttcggtcgacggagaggaactcagtcaggcgcagaag
aatgagctgctcacgactgcagggtcgactgtgcggatacggggacggttcgtgcgactg
gacagggccgcgttgtcccgggccaggaactacttccgttcgatgaccgacgccgaagac
tccacgggtacccggaccaccaccgcggagaagagtgggccgggagcagacaggtcggag
caggagcagtgggagaactcccgtacgaccctcacagtccgagaacttgtcgcagctcag
atgagggccggggaccagccgtgggatgacgaccccgacttcacccttgaggcgcaggac
tggatcggcagaatcttcggcggcagcacccacggggaggggaaagaggggaaggagtcc
accgggttggccgggacagcgttttctcccccggagcgggtgaccgtaccgtccacggtg
acggtccccctgcgggaccaccagcagcggggactgaactggctggtgtggatgtaccgg
caccggctcggagccgttctcgccgacgacatgggcctgggcaagacactgcaggttctc
agccttctggcctgggagtctgtgaacggtgagaagacgggccccaccctcgtcgtcgcc
ccgacctcggtcctggacacctggcggggagaggtggaacgccatgtcccgtccctgaag
gtgcttgtcgaccacggttccgccaaggtggcggagaaggatttcccggaggcggcggga
tctgcggacatcgttctgaccagctacggcacagttgcccggaatgccggtcggtacgcc
ggggtccactggggaagggtcgtcgccgatgaggcacagaacatcaagaatcccggcacc
gcccagtcacgggcggtgcgttccctggaggccgaccaccggctcgcgctcagcggaacc
ccggtggagaaccggctgtcggagttgcacaccctgatggatttctgcaaccccggtctg
ctcggctcggcgaaggccttccacaatgcgatcgggtcccagatcgaaagggacaggaat
ccccgcgacgtcgaaaggctccaccgtcttgtcgacccattcatccttcgccgagagaag
actgacgagagcctcggcctgggcctccccggcaaacacgagtacaccgacctggtaccc
ctcaccgcagagcaggcagctctctaccaggcctatacacaggacatccgggagagactg
cagtccagttccacggagaggcgcagcggactggtgctggcagcgctcacccacttcaag
gagatctgcaaccaccctgcacacttcagcggggacggatccggtgtgaagagggacggt
gtgcaccgctccggcaaggtggagaggctctggcagatcgtcggtgacgccctggccggc
caccgtcgtgtgctggtgttcactcagttcccgtcgttcggccgcatgctcgcccctgag
atggagaaagatttcggcatcgaggttcccgtgctccacggaggtctcagcaggaaggcc
aggaccacactggtcgaccgtttccaggagtctgacggcccggaggtcatgatcctgtcc
acccgtgcgggaggaaccggtatcaccctcaccagagcgagcgtggtggtgcacatcgac
cggtggtggaaccccgccgtcgaggaccaggcgaccgaccgggcgtaccgtatcggccag
ggtcaggaggtcagcgtccacaaactcatcgccacaggtaccctcgacgagaggatcaac
gacatcctcggagcgaaaagggacctcgccggagatgtcgtcagcgcgggcgagagctgg
ctgaccaggatggacaatgatgctctccaggacctctggcgtctggagaactccacctcg
gaccgcagattcggcacaggcggcccggacggtgaggaggagctgcagaaagcggcggaa
ctggcggaactgcagaaggcggagttccgggaggatctcgcccgcaggtacccggtgaaa
aacgtcagcgacaatgaaggtgacagtgatgacggacagcagtga
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