Corynebacterium provencense: Csp1_18890
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Entry
Csp1_18890 CDS
T06939
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cpre
Corynebacterium provencense
Pathway
cpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csp1_18890 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpre03019
]
Csp1_18890 (rng)
03009 Ribosome biogenesis [BR:
cpre03009
]
Csp1_18890 (rng)
Enzymes [BR:
cpre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Csp1_18890 (rng)
Messenger RNA biogenesis [BR:
cpre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Csp1_18890 (rng)
Ribosome biogenesis [BR:
cpre03009
]
Prokaryotic type
rRNA processing factors
Csp1_18890 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
HC2
DnaJ_CXXCXGXG
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AWT26662
UniProt:
A0A2Z3YPH5
LinkDB
All DBs
Position
complement(2134364..2138536)
Genome browser
AA seq
1390 aa
AA seq
DB search
MAKTSQELAAAAAATTTEDMGEKVRVHALARALGVPSAEMVQILATQGIEGKRATSTLPR
AQVTEVLERLTADGAPPEPQKKAETKKKSPAKKTTAKKATTAKKATTAKKAAAKKTTARK
TAASKADTAQSTGDVAATTDTSETAGTPGTTSGDVVTVDKVADDQPVDGKLTKKGAAGAS
AGKPSAKKSPARKAAARKDPARKAATRKDPSGKSAAEQGTPAGEGTTTPDDAAESVDAPT
TDSKSRRGSGRSRRSRTASAGSTSATAPAGAAQPATEPTAGQVDAAPQQGDSGSDATVDA
LIDRIAESVRAPEKSATQEPVKESGDAVTGTPRRVRRRIVRRVGSRSAASDAELLRARKA
AQRSDAVSADAGSTGRAEASATSDGTPSGKGDGPGAVSGHADEQPGGRSRRRGRRGRGRG
RGDQDRHEVRESSENREHRENEHRENRESAGTGGPQASEHRTDVTERSGVPDGLPVLTEG
SEFIDEPVKLKGSTRLESKRRWRQEQGHEKNKIVTRAEFLARRENVDRAMVVRDSERSDH
PGTTTQVGITEDGILVEHVVTSETQSSIIGNIYLGRVQNVLSSMEAAFIDIGTGRNAVLY
AGEVDWRSSHLHARTRRIEAALRAGDQILVQVIKDPLGHKGARLTNRLSFAGRYLVYIPG
GRTHGISRKLPEAERKRLKGILNRVVPDDGGTIIRTAAEGVSEELIAEDVHRLHQRWLDI
CEAEEKARGRKGSHPVTMYEEPNMLVKVIRDIFNEDFNELVVDGEKSWEIVRDYVHRMAP
DLESRLVRYRPEDHGGRDVFEDRQLDEQLAKALSRTVWLPSGGYLIIDRTEAMTVIDVNT
GSFVGSGGNLEETVTLTNLEAAEEIVRQMRLRDMGGMIVVDFIDMVLPENRDLMLRRLTE
YLGRDRTRHKVSEVTSLGLVQMTRKRLGTGLLETFSTECPTCGGRGVIIHADPVEHNPED
EDNHGDRRDHGHRSEKRQARELQEVRRRHEKDRAQQADVRDTVDSGDSGDTAEGTDGDRS
GGHGGERHSQEKHRHDRSERRESHPEKKSGGHRKAENNRSGDAGSTSGARDHRDRDRDRD
RDHRDRDRAPEGSADSGRGAVTDGAPVRDDSPRRGRRRVVRRVIRGDRDIRDSAAVRDSG
DSGDGGDVRDGRGGSSDRRRTDRYGQDDRPHRRGSGASARSDQSVAEIAAQAVARAGAED
PDEPSGADYVSDQVTGKVTDAHGTEDGGQHHGGEVRLGTDRRGRRRVRRVVRPAAGRNVT
QTATRSPRERVAAVTEPQTEPQITAAPAAEGTSAGGTRTYEEARAEYESSPRRRRRTRGR
SRSDVPPVESDFAGGSAAPAGPADSATENTGAGTSSTATATSTASSSVPSTVSSGAPRRG
RRRVVRTGRR
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaccagccaggaactcgcggcagcagccgcggcgacgacaacagaagacatg
ggggagaaggtccgcgtacacgcgctggccagggcactcggcgtccccagcgccgaaatg
gtgcagatactcgccacccaggggatcgagggcaagcgcgcgacctccactctgcccagg
gcgcaggtgacggaggtgctggagcggctcacagcggacggagcaccgccggagccgcag
aagaaggcggagacgaagaagaagtctccggcaaagaagaccaccgcgaagaaggcgacc
accgcgaagaaggcgaccaccgcgaagaaggcggccgccaagaagaccaccgccaggaag
actgcggcgtcgaaggccgacacggcacagtccaccggggatgtcgccgcgaccaccgac
acctcagagaccgccgggactcccgggacgacgtccggcgacgtcgtgaccgtggacaag
gtcgccgacgaccagccggtggacgggaagctgacgaagaagggtgcggccggggcgtcc
gcgggaaagccgtccgccaagaagtcacccgccagaaaagctgccgccagaaaagatccc
gccagaaaagctgccaccagaaaagatccctccgggaagtccgctgcagagcagggcaca
cctgccggcgaggggaccaccacgccggatgacgccgcggagtccgttgacgccccgacg
acagacagtaagtcacgacggggaagcggacgttcccgcaggtcacggactgcttccgcc
ggatcaacctccgccactgcgccggccggggcggcacaaccggcgacggaaccgaccgca
ggacaggtcgacgcggcacctcagcagggtgacagcggcagtgacgccacggtcgacgca
ctcatcgaccggatcgccgagtccgtccgggcaccggagaagtcggccacccaggaaccg
gtgaaggaatccggggacgccgtgaccggcacaccccgtagagtccgtcgcaggatcgtc
cgcagggtcggctcccgctccgcggcgtccgacgccgaactgctcagggccagaaaagca
gcccaacggtccgacgctgtctccgcagacgcgggcagcaccggcagggcggaggcctcc
gccacctcggacggcacgccctccggcaaaggagacggccccggtgccgtcagcggtcac
gctgacgagcagccgggcggccgtagccgtcgtcgtggccgccgtggtcgtggccgcggt
cgtggcgaccaggaccgccacgaggtcagggagagcagtgagaaccgggaacaccgggag
aacgaacaccgcgagaaccgggagagcgccggaaccggcggtccacaggcgtcggaacac
cgcaccgatgtgacggagcgctccggcgtcccagacggtcttccggtcctcaccgaggga
tcggagttcatcgacgagccggtgaagctcaagggctcaacccgcctcgaatcgaagcgt
cggtggcggcaggaacagggtcacgagaagaacaagatcgtcaccagggcggagttcctc
gcccgccgggagaatgtcgaccgggccatggtcgtcagggattccgagcgcagtgaccac
ccgggcacaaccacccaggtcggcatcaccgaggacgggatcctcgtcgaacatgtcgtc
accagcgaaacgcagtcctcgatcatcgggaacatctacctgggcagagtgcagaacgtg
ctgtccagcatggaggcggcgttcatcgacatcggaaccggtcgcaacgcggtcctctac
gccggcgaagttgactggcgttccagtcacctgcacgcccgcacccgtcgcattgaggcg
gcgctgcgggcaggagaccagatcctcgtccaggtgatcaaggacccgctcgggcacaaa
ggtgcccggctgaccaaccgactcagcttcgcgggacgctacctggtctacattccggga
ggcaggacccacgggatctcccgcaagcttccggaagcggagcgtaagcggctgaagggg
atcctcaaccgcgtcgtccccgacgacggcggcaccatcatcaggaccgccgccgaggga
gtatccgaggaactcatcgccgaggacgtccaccggctccaccagcgttggctggacatc
tgtgaagccgaggagaaggcccgcgggcgtaagggatcacacccggtgaccatgtacgaa
gagccgaatatgctcgtcaaggtcatcagggacatattcaacgaggacttcaacgaactc
gtggtcgacggtgagaagtcctgggagatcgtccgggactacgtccaccgcatggcgccg
gatctcgagtcccgtctcgtgcgctaccggcctgaggaccacggtggccgtgatgtcttc
gaggaccgtcagctcgacgaacagctcgccaaggccctgagccggacggtgtggctgccg
tccggcgggtacctgatcatcgaccgcaccgaggcgatgaccgtcatcgacgtgaacacc
ggcagtttcgtcggttccggcgggaacctcgaggagacggtgacgctgacgaaccttgag
gcggctgaggagattgtccgtcagatgcgtctgcgggacatgggagggatgatcgtcgtc
gacttcatcgacatggtcctccccgagaaccgtgaccttatgttgcgtcggctcaccgaa
tacctgggtcgcgacaggacccggcacaaggtgtccgaggtcaccagtctgggcctggtg
cagatgacccgcaagcgtctggggaccggtctgctggagactttctccaccgagtgcccg
acctgcgggggacgcggcgtgatcatccacgccgacccggtcgagcacaacccggaggac
gaggacaatcacggggaccgacgtgaccacgggcaccgttccgagaagcgtcaggcccgt
gaactgcaggaggttcgccgccggcacgagaaggaccgcgcacagcaggccgatgtccgg
gacaccgtagattccggtgactccggcgacaccgctgaaggcactgacggcgacaggtcc
ggagggcacggcggagagaggcactcgcaggagaagcacaggcacgacaggtcagagcgc
agggagtcgcacccggagaagaagtccggcggacatcggaaagcggagaacaaccgttcc
ggggacgccgggagcacctccggggcacgggaccacagggaccgggaccgtgacagggac
cgggaccacagggaccgtgacagggcacctgagggttccgctgactccggacgtggcgcc
gtcaccgacggtgcaccggtccgggacgacagcccgcgccggggacgccgccgcgtggtg
cgtcgtgtgatccgtggcgaccgtgatatccgtgacagcgcagcggtccgtgacagcggt
gacagcggtgacggcggtgacgttcgtgacggccgtggtggttcttccgaccgtcggcgc
acggaccgctacggccaggacgaccgtccgcaccgtcgcggctccggtgcctcggcccgg
tccgatcagtcggtggcggaaatcgccgcgcaggcggtcgcccgtgcaggtgccgaggac
ccggacgaacccagcggggcagactacgtgtccgaccaggtgactgggaaggtcactgac
gcacacggcacggaagacggtggacagcaccacggtggtgaggttcgcctcggcaccgac
cgtcgtggacgccgtcgcgtccgtcgcgtggtccgtccggctgccggccggaacgtcacg
cagacagcgacgaggtcaccgcgcgagcgggttgccgcagtcacggaaccgcagacggag
ccgcagatcacggcagctccggcggcggaaggtacgtccgccggcggtacccgcacctat
gaggaggcccgggcggagtacgaatcctccccgaggcgcagacgccggacccggggacgc
tcccggtccgatgttccgccggtcgagtccgacttcgccgggggctctgccgcaccggcg
ggaccggcggactcggcgacagagaacaccggggccggaacctcgtccacggccacggcg
acttctacggcgtcgtcctccgtgccctccaccgtgtcttccggggccccgcgccgcgga
cgccggcgagtcgtccgcaccggcaggcgctga
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