Crassaminicella profunda: K7H06_00020
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Entry
K7H06_00020 CDS
T07525
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
cprf
Crassaminicella profunda
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cprf03000
]
K7H06_00020
Transcription factors [BR:
cprf03000
]
Prokaryotic type
Helix-turn-helix
Other families
K7H06_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
AAA_5
PAS_4
PAS_9
AAA_16
HTH_30
PAS_8
AAA
Mg_chelatase
AAA_2
Bac_DnaA
AAA_7
DUF815
HTH_28
FtsK_SpoIIIE
Mga
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
QZY57382
LinkDB
All DBs
Position
2411..3814
Genome browser
AA seq
467 aa
AA seq
DB search
MIFSQKNVEKILDHVEEGIQIIDGRGRIVYFNRAAAEHEEIKREEAVGKYILDVYPSLDP
ETSTLLRAIEKGAPTFDIQQTFLNYKGKKITTINSSFAIKARDKIVGAIEISKNITDVKE
LSERVVALQEQLIDKKKGNKSNKNGDSAKFAFFDIIGRSKEIVKVKGMAMKAAQTASPVL
VYGETGTGKELFVHALHTASCRRNKPFIAQNCGALPAALLESILFGTVKGSFTGADNRAG
LFELANGGTLFLDEINSMPLELQVKLLRVLQDGTIRRVGDSRTRQVDVRIVAASNEDPLS
AVENKRLRRDLYYRLNVIALKLPELKERKGDIPILIKHFIDKFNKRLNKEVLKVSDEVLQ
AFENYDWPGNVRELEHVIEGAMNLMDENIITMDCLPVHFERFNKRSLKKEIDIQNLSLKE
ALKNLEIEIIQNALKEGDGNISHAADKLQIPRQTLQYKIKKYKITKC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgattttttcgcagaaaaatgtagaaaaaatattagaccatgtggaagaaggcatacag
attattgacggaagaggacgaatcgtgtattttaatagggctgcagcagaacatgaggaa
atcaaaagggaagaggcagtagggaaatatattttagatgtttatccttctttagaccca
gaaacaagtactctccttcgggccattgaaaagggtgctcctacctttgatatccaacag
acctttttaaactacaaaggaaaaaaaatcacaacaattaattcatcttttgctataaaa
gcaagggataaaattgttggagctattgaaatatctaagaatattacagatgtaaaggaa
ttatcagaaagagtagtagccttgcaagaacagttaatagacaagaaaaaaggaaataaa
agcaataaaaatggagattctgccaaatttgcattttttgatattatcgggagaagcaaa
gaaattgtaaaagtaaagggaatggctatgaaagctgcacaaacagcttctccagtcctt
gtttatggagaaacaggaacagggaaagaattatttgtacatgcccttcatacagctagt
tgtagaaggaataaaccttttattgcacaaaattgtggagcattaccagcagcattatta
gaaagtatactatttggaactgtaaagggaagctttacaggagctgataatcgtgcagga
ttgtttgaattagctaatggaggaaccctctttttagatgagattaattctatgccccta
gaacttcaggttaaacttcttcgtgttcttcaggatgggacaattagaagagttggggat
agtagaacaagacaagtagatgtgagaattgtagcggccagtaatgaagatcctttaagt
gctgtggaaaataaaaggttgaggcgagatctttattatcgattaaatgttatcgcatta
aaattgccagaacttaaggagagaaaaggagacattccaatccttataaagcattttatt
gataaatttaataaaagattgaataaggaagttttaaaggtatctgatgaagtgcttcag
gcctttgaaaactatgattggcctggaaatgtaagggaattagagcatgtgattgaaggg
gcaatgaatttgatggatgagaacatcatcacaatggattgtttacctgttcattttgag
agatttaataaaagaagcttaaagaaagagatagacatacaaaatctttctttaaaggaa
gcattgaaaaaccttgaaatagagattattcaaaatgctcttaaagagggagatggcaat
attagccatgcagcggataaattgcagattccaaggcaaacccttcagtataaaattaag
aagtacaaaataactaagtgctga
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