Crassaminicella profunda: K7H06_03240
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Entry
K7H06_03240 CDS
T07525
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cprf
Crassaminicella profunda
Pathway
cprf03030
DNA replication
cprf03430
Mismatch repair
cprf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K7H06_03240
03430 Mismatch repair
K7H06_03240
03440 Homologous recombination
K7H06_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cprf03032
]
K7H06_03240
03400 DNA repair and recombination proteins [BR:
cprf03400
]
K7H06_03240
Enzymes [BR:
cprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K7H06_03240
DNA replication proteins [BR:
cprf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K7H06_03240
DNA repair and recombination proteins [BR:
cprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K7H06_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
QZY56031
LinkDB
All DBs
Position
786945..790421
Genome browser
AA seq
1158 aa
AA seq
DB search
MGDFVHLHVHTEYSLLDGAARIKPLIKTVKDLGMKAVAITDHGCMFGVIDFYKEAKKEGI
KPIIGCEVYTATRTLFDKDPIKDKRQGHLVLLAKNNEGYKNLMKIVSLGYVDGFYYKPRI
DHTVLEKYSEGIIALSACLAGEIQQRLLNKDYEGAKKEALRLEGIFGKDDFYLELQDHGM
QEQKMVNNQLIRLSQETDIPLVATNDIHYLKRSDGDIHDILLCIQTGKNIDDEDRLKFPT
KEFYLKSPKEMEDLFPYAKEALENTVKIANRCNVTFDFNQMYLPKYDVPDSYSAKEYLRK
LCNEGLKKRYKEITKELLERLEYELSTIENMGYVEYFLIVWDFIRYAKEENIMVGPGRGS
AAGSLVSYTLGITEIDPIKYHLIFERFLNPERVTMPDIDIDFCFERRQEVIDYVVRKYGK
EKVAQIITFGTMAARAAIRDVGRALNMSYAEVDAIAKKIPMQLGISIDKALEIDKGFKEI
YERDERAKYLIDAARAVEGMPRHASTHAAGVVISKEAIDEYVPLYMHNEGLTTQFTMTTL
EELGLLKMDFLGLRNLTVIRDAIESIEKNHGVKINFSNSNYDDKLAYEMISKGDTIGVFQ
LESAGMRQFMKELKPDCFEDIVAGISLYRPGPMDSIPKYIAYKNNPEKIEYLHPLLEKIL
NVTYGCLIYQEQVMQVVRELAGYSYGRSDLVRRAMSKKKMDVMEQEREYFIHGKKDEEGN
IEITGCVSKGVPKEIGNQIYDEMIDFAKYAFNKSHAAAYAVLGYETAYLKAYYPVEFMAA
LITSIMGNTTKVAQYIEDCKKKNIEILPPSVNESHHKFIVQDGKIRFGLLAVKNVGAGVI
DAIVAAREEKGKFLSFTDFCDKVDMKEINKRAIESLIKAGAFDHLGANRAQLLAIYERTI
DGIAQDRKRNLAGQVSLFQAFDEIIPANVKRDDLPDIKEFAQKNLLMMEKEVVGLYISGH
PLSEYEQEVKKVSTMNAGELMEINENHENNSVKDGSYIRIGGLIGHRKNKITKNNNMMAF
ITLEDLFGSVEVLVFPKIFDKYMNLLYEDSVVIIEGKISMREEEEPKIIAEKILPLIKKN
DKGIKKLYLKISRGQELDVLFEKIKPTLKSHKGDVPVYLYLEGKNKKLKANKELWVTLND
DLIKNLIGLLGEDCVKVC
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggagattttgtacatttacatgtgcatacagagtatagtttattagatggtgcagcc
agaataaaaccccttataaaaactgtaaaggatttagggatgaaagccgtagccataaca
gatcatggatgtatgtttggtgtgattgatttttataaagaagctaaaaaggaaggaatt
aaacctattataggttgtgaagtgtatactgctactagaactctttttgataaagatcca
ataaaagataaaaggcagggtcacctagtactccttgctaaaaataatgagggctataaa
aatcttatgaaaattgtatctttaggatatgtggatggtttttattataaacctcgaata
gatcatacagttcttgaaaaatatagtgaaggcattatcgcccttagtgcatgtcttgca
ggagagatccaacaaagacttttaaataaggattatgaaggagctaaaaaagaagcatta
agactagaggggatatttggaaaagatgatttttatctagaacttcaggaccatggtatg
caggagcagaaaatggtaaacaatcaattaatcaggttaagccaagaaacagatatccca
ttagttgcaactaatgatattcactatttaaagagatctgatggagatattcacgatata
cttctttgtattcaaacaggaaagaatatagatgatgaagatcgactaaaatttcctaca
aaggaattttatctaaaatctccaaaagagatggaagacctctttccatatgcaaaggaa
gccttagaaaataccgtaaaaattgcaaataggtgcaatgtaacttttgattttaaccaa
atgtatttaccaaagtatgatgtacctgattcttatagtgcaaaggaatatttaaggaaa
ttatgtaatgaaggattgaaaaaaagatataaagaaattacaaaggaacttttagaaaga
ttagagtacgaattatctactatagaaaatatggggtatgtagaatattttctaattgta
tgggattttataagatatgcaaaagaagaaaacatcatggtaggaccaggaagaggatct
gctgcaggaagcttagtttcatatacattaggaattacagaaattgatcctattaagtat
catctcatttttgagcgttttttaaatccagaacgtgtaaccatgccggatattgatatt
gatttttgctttgaaagaaggcaagaagttattgattatgtagtgagaaaatatggaaaa
gaaaaggtagcacaaataatcacctttggaacaatggcagcaagagcagctataagagat
gtaggaagggcgctgaatatgtcctatgcagaagtagatgctattgccaaaaaaattcct
atgcagttgggtatttctattgataaagcattagaaatagataagggatttaaagaaata
tatgaaagagacgaaagggcaaaatatttaatagatgctgcaagggctgtagaaggaatg
ccaagacatgcatctactcatgcagctggggttgtaatttctaaagaggctattgatgaa
tatgtacctttatatatgcataatgaaggtcttacaactcaattcactatgacaacatta
gaagagttagggcttcttaaaatggactttttaggtcttcgaaatctaacagtaatcagg
gatgctatagagagtatagagaagaatcatggggtaaaaataaatttttccaatagtaac
tatgatgataagttagcttatgaaatgattagtaaaggggatactataggggtatttcag
ctagaaagtgcaggtatgaggcagtttatgaaggaattaaagcctgattgctttgaagat
atagtagcgggaatttccctttacagaccagggcctatggattctattcctaagtatata
gcttataaaaataatccagaaaaaatagaatatttacatccattgctagaaaagatcctt
aatgtaacctatggatgtttaatataccaagaacaagtaatgcaggtagttagggaactt
gctggttattcctatggacgaagcgatttggttcgccgtgccatgagtaaaaagaaaatg
gatgtgatggaacaagaaagagaatatttcattcatggaaaaaaagatgaagaaggaaat
attgaaattacaggatgtgtaagcaagggtgtaccaaaagaaattggaaatcaaatatat
gatgaaatgatagattttgccaaatatgcttttaacaaatcccatgcagcggcctatgca
gtgctaggttatgaaacagcataccttaaggcgtactaccctgttgaatttatggcagca
ctcattacgagtattatggggaataccacaaaggtagcccaatatatagaggattgtaag
aagaaaaacatagaaatactgccacctagtgtcaatgaaagtcatcataagtttattgta
caggatgggaaaattcgatttggccttttggcagtgaaaaacgttggtgcaggcgttata
gatgctattgtagccgcaagagaagagaaaggtaagtttttaagttttacagatttttgt
gataaagtggatatgaaagaaatcaataaaagagctattgagagtctcataaaagcagga
gcctttgatcatttaggagccaatcgtgcccagcttttagccatctatgaaaggacaatt
gatggaatagctcaagatcgaaaaaggaatttagcaggccaggtttcattatttcaagca
tttgatgaaatcatacctgctaatgttaaaagagatgatttgccagatatcaaagagttt
gctcagaaaaatcttttgatgatggaaaaagaagtagtgggactttatattagtggtcat
cccctttcagagtatgaacaagaagttaaaaaagtttcaaccatgaatgcaggagagtta
atggagatcaatgaaaatcatgaaaataattctgtaaaagatggatcctatataagaata
gggggactcattggacatcgaaaaaataaaatcactaaaaataataatatgatggctttc
ataacactagaagacttatttggtagtgtagaagtattagtttttcctaaaatatttgat
aaatatatgaatttattatatgaagatagtgttgtcattatagaaggaaaaataagcatg
agagaagaggaagaacctaaaattatagcagaaaaaatactacccctcataaagaaaaat
gataaagggataaaaaagttatatctaaaaataagtagaggtcaagagctagatgtttta
tttgaaaaaattaaaccgacactgaaaagtcacaaaggagatgtgccggtatacttatat
ttagaagggaaaaataagaaactaaaagcgaataaggaattatgggtaacgttaaatgat
gatttaattaaaaatttgataggattgctaggagaagattgtgtaaaagtatgttag
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