Crassaminicella profunda: K7H06_07790
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Entry
K7H06_07790 CDS
T07525
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cprf
Crassaminicella profunda
Pathway
cprf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7H06_07790 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cprf03019
]
K7H06_07790 (rny)
Messenger RNA biogenesis [BR:
cprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K7H06_07790 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Tweety
Exonuc_VII_L
DUF7669
Motif
Other DBs
NCBI-ProteinID:
QZY57470
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Position
1669042..1670580
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AA seq
512 aa
AA seq
DB search
MNSIQIVVSIVTGAIGVGIGYFIRKNIAEGKINNAENRAKEIVSEAKKQAETSKKEILLE
AKEEVHRLRNELDRENRERRNELQRLERRLQQKEETLDRKSDNLEKKDEVLNKKIKEVAD
KKEQINGIHQKQLEELERISGLTSEQAKEQLLNDTQKEIKHETAMMIKEIEQRAKEDGEK
KAKEIIAYAIQKCAADHVAETTVSVVALPNDEMKGRIIGREGRNIRALETLTGIDLIIDD
TPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAKKEVNNIIKEEGEQATF
ETGVHSIHPELIKLLGRLKYRTSYGQNVLKHSIEVSHLAGLMAAELGTDVKLAKRAGLLH
DIGKAVDHEIEGTHVDIGMGLLKKYKESSEVIHAMSTHHGDYEPHTIEAVLVTAADAVSA
ARPGARRETLETYIKRLQKLEEIANSSEGVEKSFAIQAGREIRIMVKPDEMADEDIIYLA
REVTKKIESELEYPGQIKVNVIRETRAIEYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
attaattctattcagattgtagtaagcattgtaacaggtgctataggtgttggaattgga
tattttataagaaagaatattgctgagggtaaaataaataatgcagaaaacagagccaag
gaaatagtttcagaagctaaaaagcaggctgaaacatctaaaaaagagattttacttgaa
gcaaaagaagaagttcatagattaagaaatgaacttgatagagaaaatagagaaagacgt
aatgaactacaaaggttggaaagaagattacagcaaaaggaagaaacattagatagaaaa
tctgataatctagaaaagaaggatgaagtactcaacaaaaaaataaaagaagtagcggat
aaaaaggaacaaataaatggaattcatcaaaaacaacttgaagagttggaaagaatatca
ggtttaacgtctgaacaagcaaaagaacaacttttaaatgatacgcaaaaagaaataaaa
catgaaacggctatgatgattaaagaaattgaacaaagagcaaaagaagatggagaaaag
aaagcaaaagaaattattgcttatgcaatacaaaaatgtgcagcagatcatgtggctgag
actaccgtatctgtagtagcccttccgaatgatgaaatgaaggggagaattattggtagg
gaaggaagaaatataagagcattagagacattaacaggaatagatctaataattgatgat
acaccagaagcagtaattctttcaggcttcgatcctataagaagagaagtagcaagaata
gcactagaaaaacttatcgtagatggaagaattcatccagctagaattgaagaaatggta
gaaaaagctaagaaagaagtaaacaatattattaaagaagagggtgaacaagcaacattt
gaaacaggtgttcacagtattcatcctgagttaatcaaattattaggtagattaaagtat
agaactagttatggccaaaacgtattaaaacattctatagaagtgtcccatttagcaggg
ttgatggctgctgaattaggtacagatgtgaaattagcaaaaagagcaggacttcttcat
gatattggaaaagctgtagatcatgaaatagagggtactcatgtggatataggtatgggt
ctattaaagaaatataaagaatctagtgaagtgatacatgctatgtctactcatcatggg
gattatgagcctcatacaattgaagcagtgctagttacagctgctgatgctgtatctgcg
gctagaccaggtgcaagaagagagacattagaaacttatattaagagattacaaaaactt
gaagaaatagcaaactcaagtgaaggcgtagaaaaatcatttgccattcaagcaggtcgt
gagataagaattatggtaaaaccagatgaaatggcagatgaagatattatttatttagca
cgtgaagttacaaagaaaattgagagtgaattagaatatcctggtcaaataaaggtgaat
gttattagggagacaagagcaattgaatatgcaaaataa
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