Crassaminicella profunda: K7H06_09015
Help
Entry
K7H06_09015 CDS
T07525
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cprf
Crassaminicella profunda
Pathway
cprf00260
Glycine, serine and threonine metabolism
cprf00460
Cyanoamino acid metabolism
cprf00630
Glyoxylate and dicarboxylate metabolism
cprf00670
One carbon pool by folate
cprf00680
Methane metabolism
cprf01100
Metabolic pathways
cprf01110
Biosynthesis of secondary metabolites
cprf01120
Microbial metabolism in diverse environments
cprf01200
Carbon metabolism
cprf01230
Biosynthesis of amino acids
cprf01240
Biosynthesis of cofactors
cprf04981
Folate transport and metabolism
Module
cprf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K7H06_09015
09102 Energy metabolism
00680 Methane metabolism
K7H06_09015
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K7H06_09015
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K7H06_09015
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K7H06_09015
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K7H06_09015
Enzymes [BR:
cprf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K7H06_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
DegT_DnrJ_EryC1
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
QZY57040
LinkDB
All DBs
Position
complement(1912546..1913778)
Genome browser
AA seq
410 aa
AA seq
DB search
MNFENLKSVDMDVFEAIQKEIKRQQNKIELIASENFVSPAVMEAMGSQLTNKYAEGYPAK
RYYGGCEHVDVVEDLARERLKKLFSAEHANVQPHSGANANIAVYFAMLKPGDTVLGMNLS
HGGHLTHGSPVNISGKYYNFVDYGVDKELETIDYEEVRKVALETKPKLIVAGASAYPRTI
DFKKFREIADEVGAYLMVDMAHIAGLVAAKLHPNPCEYADFVTTTTHKTLRGPRGGAILC
KEEFAKKIDKAIFPGVQGGPLMHVIAAKAVSFKEALTDEFNLYQEQIIKNAKKLSEELIK
RDFRLVSGGTDNHLILIDLRNKDITGKEAEKRLDEAGVTVNKNTIPYDPQSPFVTSGIRI
GTPAVTTRGMKEEDMVEIAEIIRMVIDCPEKVDEAKELVEKLCGKFPLYK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaaatttaaaaagtgtagatatggatgtatttgaagccattcaaaaggaa
attaaaagacagcaaaataagattgagttaattgcatctgaaaattttgttagtcctgct
gtaatggaagctatggggagccaattaaccaataaatatgcagaaggatatccggctaaa
agatattatggtggctgtgaacatgttgatgtggtagaagatttagcaagagaaagatta
aaaaaattattttctgcagaacatgcaaatgtacaacctcattcaggagcgaatgcgaat
atagctgtatattttgcaatgctaaaacctggagataccgttttagggatgaatctttcc
catggaggacatcttactcatggaagtcctgtaaatatttcaggaaaatactataatttt
gtagactatggtgttgacaaagaattagaaaccattgattatgaagaggtgcgaaaagta
gcgttagagacaaaaccaaaattaattgttgcaggtgctagtgcttatccaagaaccatt
gattttaagaagtttcgagaaattgcagatgaagtgggtgcctatttgatggtagatatg
gcacatattgcaggacttgtagctgctaaattgcatccaaatccttgtgaatatgcagat
tttgttacaacaacaacccataaaacattaagaggaccaaggggaggcgcaattctttgc
aaagaagaatttgccaaaaaaatagacaaagctatttttccaggagtacaaggtggacct
cttatgcatgtgattgctgcaaaagctgttagctttaaagaagccttaacagatgaattt
aatctttatcaagagcaaattataaaaaatgcgaaaaaattatctgaagaattaatcaaa
agagattttagattagtttcaggtggaacagataatcatttaatattaatagatttaaga
aataaagatataacaggtaaagaagctgaaaaaaggttagatgaagcaggtgtaaccgtt
aataaaaatacgattccatatgatccacaaagtccttttgtaacaagtgggattcgaata
ggtacaccagctgtaacaacaagagggatgaaggaagaagatatggtggagattgcagaa
attattcgtatggttattgattgtcctgaaaaggtggatgaggcaaaagagctagtagaa
aagctgtgtggaaaatttccattatataaataa
DBGET
integrated database retrieval system