Crassaminicella profunda: K7H06_10390
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Entry
K7H06_10390 CDS
T07525
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cprf
Crassaminicella profunda
Pathway
cprf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7H06_10390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cprf03019
]
K7H06_10390
03009 Ribosome biogenesis [BR:
cprf03009
]
K7H06_10390
Enzymes [BR:
cprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K7H06_10390
Messenger RNA biogenesis [BR:
cprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K7H06_10390
Ribosome biogenesis [BR:
cprf03009
]
Prokaryotic type
rRNA helicases
K7H06_10390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QZY57293
LinkDB
All DBs
Position
complement(2186216..2187598)
Genome browser
AA seq
460 aa
AA seq
DB search
MKNNFLNIGIGDELKDRLDENGIVEPTPIQIQAIPPLLAGKDVIGKAQTGTGKTLAFLLP
MMEKIDVNKPHVQGLIIAPTRELAIQITAEAKKLLSAKGIKILAAYGGQDVVQQIRKLKG
NIHMVIGTPGRLLDHIRRESVDFGKLSMLVLDEADQMLHMGFLKEVEMIIRHTPKRRQTM
CFSATMPKQINSLAAKYMKEPVAISVKSNNVTLDEITQLVIQTTDRGKREALYKVLDDQK
PFMAVIFCRTKRRASALNEELQKNGYNSDELHGDLTQAKREKVMKSFRRLQVQFLVATDV
AARGLDIEGMTHVFNYDIPQDAESYIHRIGRTGRAGKNGVAITFVTQKDRETLNQIEKGI
KMTMKKINMVKEEDRGSSEWREKGNRGYNKFKKFGKEKDQRSGRKKSSKDQRSSNNKKNE
GSKKGKGKFAGTKKQDTTKGNSRGRSEKSNSKRYSKGKKS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataattttttaaatattggaattggagatgaacttaaagatagattagacgaa
aatgggattgtagaaccaacacctattcagatacaggccataccaccattgttagcaggc
aaggatgttataggaaaggctcagacaggaacgggaaaaactcttgcttttttacttccc
atgatggaaaaaattgatgtgaataaacctcatgtacaagggcttattattgcgcctact
cgagagttagcaattcagattacagcagaggcaaagaagcttttgtcagctaagggaatt
aaaatcttggcagcttatggaggacaagatgtagtacagcagattagaaaacttaagggg
aatatacatatggttattggtactcctggaagattactagatcatattagacgagaaagt
gtagattttggtaaactctctatgctagtattagatgaagcagatcagatgcttcacatg
ggatttttaaaagaagtagagatgattatacgccatacacctaaaagaagacaaaccatg
tgtttttctgcaaccatgccaaagcaaataaattcattggctgcaaaatacatgaaagaa
cctgtagccataagtgtaaaaagtaataatgttacattagatgaaataacacaattagtt
attcagacgacagatcgagggaaaagggaggcactttataaggtgctagatgatcaaaaa
ccatttatggcagtgatcttttgtcgtacaaagcgtcgtgcaagtgcacttaatgaagaa
ttacagaagaatggatacaattcagatgaactccatggagatttgactcaggcaaaacgc
gagaaagtaatgaaatcatttagaagattacaagtgcaatttctcgtagcaacagatgtg
gccgctcgtggattagatatagaggggatgactcatgtatttaattatgatatccctcaa
gatgcagagagttatattcaccgtataggacgtacaggacgtgctgggaaaaatggtgtt
gctattacttttgttacacagaaagatcgagaaacattgaatcagattgaaaaaggaata
aaaatgaccatgaagaaaataaatatggttaaggaagaggatcgaggaagtagtgagtgg
agagaaaagggtaatagaggatacaataaatttaaaaagtttggaaaagaaaaagatcaa
agatctggacgcaagaaaagtagcaaggatcagcgatcatccaacaataaaaagaatgag
ggtagcaaaaaaggtaaggggaaatttgcaggaacaaaaaaacaagatactacaaaagga
aattctcgtggaagatctgaaaaatctaatagtaaaagatattctaaagggaagaaatct
taa
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