Crassaminicella profunda: K7H06_12760
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Entry
K7H06_12760 CDS
T07525
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cprf
Crassaminicella profunda
Pathway
cprf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K7H06_12760
09124 Replication and repair
03420 Nucleotide excision repair
K7H06_12760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cprf03021
]
K7H06_12760
03036 Chromosome and associated proteins [BR:
cprf03036
]
K7H06_12760
03400 DNA repair and recombination proteins [BR:
cprf03400
]
K7H06_12760
Enzymes [BR:
cprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K7H06_12760
Transcription machinery [BR:
cprf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K7H06_12760
Chromosome and associated proteins [BR:
cprf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K7H06_12760
DNA repair and recombination proteins [BR:
cprf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K7H06_12760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
ResIII
preSET_CXC
EF-hand_14
PhoH
P4Ha_N
Motif
Other DBs
NCBI-ProteinID:
QZY53922
LinkDB
All DBs
Position
complement(2692700..2695048)
Genome browser
AA seq
782 aa
AA seq
DB search
MSNTKEIKISVRNLVEFILRSGDLDASFRSMSRAVEGTRAHQKVQNAQDTNYEAEVTLKH
KLEHEGFTFLIEGRADGIITEPCSICIDEIKSTTKPLESIDENYNEIHWAQAKVYAYIYA
LQNELDTIDVQLTYFQLETEKVKNIRKTFTFSHVEEFFCGIVDRYIIWARLTSDWCKLRD
LSVKDLTFPFEKYRIGQRELAVSVYRTIKDQKKLFAQAPTGIGKTISTLFPTVKAFSEGH
TSKIFYLTAKTITRQVAEEAFIKMREKGLRFKTLTLTAKDKICFKEERNCDPEYCEYAKG
HFDRINGAILDILQNEDELSRRGIESYARKHHICPFELSLDLATWVDALICDYNYIFDPR
VNLKGLFEFHNNDCTFLVDEAHNLVDRAREMFSATLYKKPFLDLKKVFKEDEPRIAKALD
RLNKYMLKVKKLCEEKDFYIQKEMFEDILYLLNRLISESEEFLAEKKGKKGYQELLELFF
DCLSFIRIAELYDDRYVSYVEKENKDILLKMFCLDPSYLLREAVKRGKSAIFFSATLSPI
EYFKDILGGDIEDKSIILPSPFDQNNLCLMIASSISTKYKDREYSYYAVADYIKANISQK
LGNYLVFFPSYKYMQEVYERFEEKYPEYRTIIQGNIMNEEQREDYLRAFEENPKIPLVGF
AVMGGIFGEGIDLKGNRLIGAIIVGVGLPQICLERNIIKDYFNEKNNNGFNYSYIYPGMN
KVLQAAGRVIRTEKDKGVVLLIDERFNYASYKRIFPREWNHRINIKSEEEMIQTLEKFHQ
KN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatacaaaggaaataaaaatatctgttagaaatttagttgaatttattttgcgt
tcgggagatttagatgcaagctttagaagtatgtcaagggctgtagaaggtacaagagct
catcaaaaggtacaaaatgcacaagataccaattatgaagctgaagttacgctaaaacat
aaacttgaacatgaaggttttacatttttaatagaagggagagcagatggtattataact
gagccttgctctatttgtatagatgaaataaaatctactacaaagccccttgaaagcatt
gatgaaaattataatgaaatacattgggcacaggcaaaagtttatgcctatatatatgct
cttcaaaatgaattagatactatagatgttcaattaacttattttcaattagaaacggaa
aaagttaaaaatataagaaaaacttttaccttctctcatgtagaagagtttttttgtggt
attgtagaccggtacattatttgggcaaggttaacttctgattggtgtaaacttcgagac
ctttcagtaaaagatttaacatttccttttgaaaaatatcggattggacaaagagaactt
gccgtttcagtttatagaactattaaagatcaaaaaaagctatttgcacaagcccctaca
ggaataggaaaaactatatcaaccctttttccaacagtaaaagcctttagtgaaggacat
acatcaaaaatattttatcttacagctaaaaccattacgagacaagttgcagaagaagcc
tttataaaaatgagagaaaaaggattaagatttaaaacattaaccttaacagcaaaggat
aaaatctgttttaaagaggaaagaaactgtgacccagaatattgtgagtatgcaaaggga
cattttgatagaataaatggagctattcttgatatacttcaaaatgaagatgaattatca
aggagaggaatagaaagctatgcaagaaagcatcatatttgtccttttgagttgtcatta
gatttagctacatgggtagatgcccttatttgcgattataattatatatttgatcctaga
gtaaacttaaaaggtttatttgaatttcataacaatgattgtacttttttagtggatgag
gcacataacttagtagatcgtgctcgtgaaatgttttcagcaactttatataaaaagcca
tttttagatttaaaaaaagtatttaaagaggatgaacctagaattgcaaaagcattagat
cgactgaataaatatatgctcaaagtaaagaagctttgtgaagaaaaggatttttatata
caaaaagagatgtttgaggatatattgtatttattaaataggcttatatctgaaagtgaa
gagtttttagctgaaaaaaaaggaaagaaaggatatcaagaattattagaattatttttt
gattgtttatcctttataagaattgcagaactttatgatgatagatatgtaagttatgta
gaaaaggaaaataaagatatattattgaaaatgttttgccttgatccttcttatctatta
agggaagctgtgaagagaggaaaatcagccatatttttttcggctaccttatcacctata
gaatattttaaagatattttaggtggagatatagaggataaaagcattatattaccttct
ccctttgatcaaaataatctttgcctgatgattgcgagtagcatttcaacaaaatacaaa
gatagggaatatagctactatgcagtagcagattatataaaagccaatatatctcaaaaa
ttgggaaattatttagtgttttttccatcctacaaatatatgcaggaggtttatgaaaga
tttgaagaaaaatatcctgaatataggacaatcattcaaggaaacatcatgaatgaagaa
caaagagaagactatttacgagcattcgaagaaaaccctaaaattcctttagtaggtttt
gctgtaatgggaggaatatttggtgaaggaatagatctaaagggaaataggcttattggt
gcaattattgtaggggtaggacttcctcaaatatgccttgagagaaacattataaaagat
tattttaacgaaaaaaataacaatgggtttaattattcctatatttatccaggaatgaat
aaggttcttcaagctgcaggaagagttattcgtacagaaaaggataaaggagtagtactt
ttaatagatgaaagatttaactacgcaagttataagaggatatttcctagggaatggaat
catagaatcaatataaaatcagaagaagagatgattcaaacattagaaaaatttcatcaa
aaaaattag
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