Crassaminicella profunda: K7H06_18325
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Entry
K7H06_18325 CDS
T07525
Name
(GenBank) RNA polymerase subunit sigma
KO
K03093
RNA polymerase sigma-I factor
Organism
cprf
Crassaminicella profunda
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cprf03021
]
K7H06_18325
Transcription machinery [BR:
cprf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K7H06_18325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Mga
Cytochrom_c_NrfB-like
DUF5997
Motif
Other DBs
NCBI-ProteinID:
QZY54950
LinkDB
All DBs
Position
complement(3985941..3986672)
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AA seq
243 aa
AA seq
DB search
MGKIFDFYKKRTFEKRLTKIRDGDVALRNRFIDEYMPFIVKTVSKVLDKYVETENDEHLS
IAMEAFNEAIDKYEESKGSFINFAKIVITNRVKGARKKYTYDNKNVSLDEMEEKTLVTHQ
KKHMASNEFTHQVHLRLEIQNFSKNLEKFGIKIEELILKAPKHKDSRINAVKIAKKIANR
HNMIDKLYKTGNLPRSEIKKELGVSDKVLKNHRVFIIATIIILNSNLEELKEYVLEIGGG
DLC
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttggggaagatatttgatttttacaaaaagagaacctttgagaaaaggcttacaaaaatt
agagatggggatgtagccttaagaaatagatttattgatgaatatatgccttttattgtt
aaaactgtttcaaaggtattggataagtatgtggaaacagaaaatgatgagcatttgagt
attgccatggaagcttttaatgaagccatagataaatatgaagaaagtaaaggttcattt
ataaattttgcaaaaatagtcataaccaaccgggttaagggagcaagaaaaaaatatact
tatgataataaaaatgtttcattagatgaaatggaagagaaaacgcttgtaactcatcaa
aagaaacacatggcatccaatgaatttacccatcaggttcatttgaggttagagatccaa
aattttagtaagaatcttgaaaaatttggaataaaaatagaagaattgatactaaaagca
ccaaaacataaggacagtagaataaatgcagttaaaattgcaaaaaaaattgcaaatagg
cataatatgatagataaattatataaaacagggaatttaccaagaagtgagataaaaaaa
gaactgggtgtatcggataaagttttaaaaaatcatcgtgtattcatcattgctacgatt
attattttaaatagcaatcttgaggaactaaaagagtatgttcttgaaataggtggtgga
gatttatgttaa
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