Crassaminicella profunda: K7H06_20335
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Entry
K7H06_20335 CDS
T07525
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cprf
Crassaminicella profunda
Pathway
cprf03030
DNA replication
cprf03430
Mismatch repair
cprf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K7H06_20335 (holB)
03430 Mismatch repair
K7H06_20335 (holB)
03440 Homologous recombination
K7H06_20335 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cprf03032
]
K7H06_20335 (holB)
03400 DNA repair and recombination proteins [BR:
cprf03400
]
K7H06_20335 (holB)
Enzymes [BR:
cprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K7H06_20335 (holB)
DNA replication proteins [BR:
cprf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K7H06_20335 (holB)
DNA repair and recombination proteins [BR:
cprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K7H06_20335 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
QZY55315
LinkDB
All DBs
Position
4426816..4427796
Genome browser
AA seq
326 aa
AA seq
DB search
MDFKDIVGQEKVIHFLKGSITNKRIAHAYIFEGAKGVGKAEMAMVFAKAVQCKNYDGDVC
DQCASCLKVNTNNHPDIKIIEPEGKSIKNKQIEDFQQDLLRRPYESDKKIYIIKDANSMT
DSAQNRLLKTLEEPPEYAVIILISTNVNSFLPTIKSRCQILKFYPIGEKTIEDILKNKYD
LQTDEAKVLAAFSDGILGKALRLKESEEFRNKREETIQVMEKLLKKDPLVAFELVEFFQK
NKDNIYEILDFMLFWFRDILLLSQTSTDKFLINIDKKEILQKHMHAIGYNKIGNIINTIE
KTKNDIKANINFQLVIEMMLLTIQEV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaagatatagtgggacaagagaaggtaattcatttcttaaaagggtctatt
acaaataaacgaattgcacatgcatatatatttgaaggagcaaagggcgtaggaaaggct
gaaatggctatggtctttgctaaagcagtacaatgtaaaaattatgatggggatgtttgt
gaccaatgtgcatcctgcttgaaggttaacacaaataatcatccagacataaaaatcatt
gaaccagaagggaaaagcattaaaaataaacaaattgaagattttcaacaggatttattg
agaagaccttatgaaagtgataaaaaaatatatattataaaagatgccaattctatgaca
gatagtgcacaaaatcgtctattaaaaacattagaagagccaccagaatatgctgtaatt
atattgatcagtaccaatgtaaatagtttcttacctaccattaagtctcgttgtcagata
ttaaaattttatccaattggagaaaaaactatagaggatattttgaaaaataagtatgat
ttacaaacagatgaggcgaaagttttagctgccttttctgatgggattttaggaaaagca
ttgcgactaaaagagtctgaagaatttagaaataaaagagaagaaaccatacaagtaatg
gaaaaattattaaagaaagatccattagttgcttttgaattggttgaattttttcaaaag
aataaagataatatatatgaaatattagattttatgcttttttggttcagagacatactt
ttattgagtcaaacaagtacagataagtttttaatcaatatagataaaaaagaaatttta
caaaaacacatgcatgctataggctataataaaatagggaatattattaatacaatagaa
aaaaccaaaaatgatataaaagcaaatattaattttcaattagttattgagatgatgctt
ttaaccatacaggaggtataa
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