Candidatus Cytomitobacter primus: FZC34_01580
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Entry
FZC34_01580 CDS
T10141
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cpri Candidatus Cytomitobacter primus
Pathway
cpri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZC34_01580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpri03019
]
FZC34_01580
Messenger RNA biogenesis [BR:
cpri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FZC34_01580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
RNase_J_C
API5
Motif
Other DBs
NCBI-ProteinID:
QEK38597
UniProt:
A0A5C0UFU3
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Position
355456..357339
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AA seq
627 aa
AA seq
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MEKIINKTQQGTSNSQKRPFNRNKKNVPFNKKGMSFNRNAKANSDIEKASFDISSIDMNS
LCFMPLGGAGEFGLNLNLYHCNGKWLLVDLGMSFEDMPGSNIILPDINFIKKLDKKDIMG
LVITHGHEDHIGAIPYLIQELKIPIFAGPFTSSLIKRKLVDNNIKATLNTVNVGETFSLN
PFEVKLINVTHSIPESSMVYIKTPLGNIMHTGDWKLDNSPVTGEKTDMESLESAAKDGIL
AAVSDSTNAMTYGETVSEETVKESINEVLSKVDRKNRIVIGCFSSNVSRIDSCARLAQKY
GRKVALVGRSIHKIKESAYEHGYFANLPEFLTEEEGFKTSKDKILFICTGSQGETNSGLK
RMSENDHPRIKLDKSDTVIVSAKTIIGREKEVSGMLNNFARNNVKVITYSEDAPIHASGH
PVRSDLKKLYTLLKPKFLIPVHGERLHQNAHAELGKEMGIEPAVIKNGDILKIEQSSMKI
INNFPISKSVLDGKVVVPYDGKTMTERYWLENGCIFVSILIGNRGYFKLIATFSGICEQD
DILRDKVKERIKTAIMSLNQDDRKVQKKLASVIRKAIRYVMFELRGKDPAVFIHSTILDK
KPASPKEEKEGVQIDIDEERESDSLGD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataattaacaaaacacaacaaggaacatcaaacagccaaaaaaggccattt
aatagaaataaaaaaaatgttccattcaacaaaaaagggatgtcatttaatagaaatgcc
aaagctaatagtgatatagagaaagcatcatttgatataagcagtattgacatgaattct
ttatgctttatgccattaggtggagctggagaatttggacttaacttaaacttgtatcat
tgcaatggaaaatggttattagtagatttaggaatgagcttcgaagatatgccaggatcc
aatataatactaccagatattaattttatcaaaaaattagacaaaaaagatattatggga
ttggtaatcactcatggacatgaagatcatattggagctattccttacttaatccaagaa
ttaaagattcctatttttgcaggtccatttacatcttctttaataaaaagaaaactagta
gataataatattaaagcaaccttaaatactgtaaacgttggagaaacattttcactaaac
ccatttgaagttaagcttattaatgtaacacactctattcctgaaagctcaatggtatat
ataaaaacacctttaggtaatattatgcatacaggtgattggaagctagataatagccct
gtcactggagaaaaaactgatatggaatcattggaatctgctgcaaaagatggaatatta
gctgctgtatctgactcaacaaatgctatgacttatggagagactgtatctgaagaaact
gttaaagagtctattaatgaagtactatcaaaagttgatagaaaaaaccgtatagttatt
ggttgcttctcatcaaatgtttctaggatagattcatgtgctagattagcacaaaaatat
ggaagaaaagttgcgttagttggaagatccatccataaaatcaaagaatcagcttatgag
catgggtattttgctaacttacctgaatttttaactgaagaagaaggattcaaaacatct
aaagataaaattttatttatttgcacaggatcacaaggggaaacaaactctggactaaaa
agaatgtctgaaaatgaccaccctagaattaaattagataaaagtgacacggttatagtt
tcagctaaaactattataggaagagaaaaagaagtatcaggaatgttgaataattttgca
agaaataatgtaaaagtaattacatattctgaagatgcacctatacatgcatcaggtcat
cctgtaagatcagatctaaagaaattatatacattattaaagcctaaatttttaattcct
gttcatggagaaagattacatcaaaatgcccatgctgaacttggaaaagaaatgggaata
gagcctgctgttataaagaatggtgatatattaaaaattgaacaatctagcatgaaaatc
attaataactttcctatctctaaatctgtattagatggtaaggtagtggttccatatgat
ggaaaaaccatgactgaaagatattggttagaaaatggatgtattttcgtgagcatacta
attggaaacagaggatatttcaaattaatagcaacattttcaggaatatgtgagcaggat
gatattttaagagacaaagtaaaagaaagaattaaaactgctattatgtcattaaaccag
gatgatagaaaagttcaaaagaaacttgcaagcgttattaggaaagcaattaggtatgta
atgtttgaattaagaggaaaagatcctgctgtatttatccattcaactattttggacaaa
aaacctgcatctccaaaagaagaaaaagaaggggtacaaattgacattgatgaagaaaga
gaatctgattcattaggagattga
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