KEGG   Candidatus Cytomitobacter primus: FZC34_01580
Entry
FZC34_01580       CDS       T10141                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
cpri  Candidatus Cytomitobacter primus
Pathway
cpri03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FZC34_01580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpri03019]
    FZC34_01580
Messenger RNA biogenesis [BR:cpri03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FZC34_01580
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 RNase_J_C API5
Other DBs
NCBI-ProteinID: QEK38597
UniProt: A0A5C0UFU3
LinkDB
Position
355456..357339
AA seq 627 aa
MEKIINKTQQGTSNSQKRPFNRNKKNVPFNKKGMSFNRNAKANSDIEKASFDISSIDMNS
LCFMPLGGAGEFGLNLNLYHCNGKWLLVDLGMSFEDMPGSNIILPDINFIKKLDKKDIMG
LVITHGHEDHIGAIPYLIQELKIPIFAGPFTSSLIKRKLVDNNIKATLNTVNVGETFSLN
PFEVKLINVTHSIPESSMVYIKTPLGNIMHTGDWKLDNSPVTGEKTDMESLESAAKDGIL
AAVSDSTNAMTYGETVSEETVKESINEVLSKVDRKNRIVIGCFSSNVSRIDSCARLAQKY
GRKVALVGRSIHKIKESAYEHGYFANLPEFLTEEEGFKTSKDKILFICTGSQGETNSGLK
RMSENDHPRIKLDKSDTVIVSAKTIIGREKEVSGMLNNFARNNVKVITYSEDAPIHASGH
PVRSDLKKLYTLLKPKFLIPVHGERLHQNAHAELGKEMGIEPAVIKNGDILKIEQSSMKI
INNFPISKSVLDGKVVVPYDGKTMTERYWLENGCIFVSILIGNRGYFKLIATFSGICEQD
DILRDKVKERIKTAIMSLNQDDRKVQKKLASVIRKAIRYVMFELRGKDPAVFIHSTILDK
KPASPKEEKEGVQIDIDEERESDSLGD
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggaaaaaataattaacaaaacacaacaaggaacatcaaacagccaaaaaaggccattt
aatagaaataaaaaaaatgttccattcaacaaaaaagggatgtcatttaatagaaatgcc
aaagctaatagtgatatagagaaagcatcatttgatataagcagtattgacatgaattct
ttatgctttatgccattaggtggagctggagaatttggacttaacttaaacttgtatcat
tgcaatggaaaatggttattagtagatttaggaatgagcttcgaagatatgccaggatcc
aatataatactaccagatattaattttatcaaaaaattagacaaaaaagatattatggga
ttggtaatcactcatggacatgaagatcatattggagctattccttacttaatccaagaa
ttaaagattcctatttttgcaggtccatttacatcttctttaataaaaagaaaactagta
gataataatattaaagcaaccttaaatactgtaaacgttggagaaacattttcactaaac
ccatttgaagttaagcttattaatgtaacacactctattcctgaaagctcaatggtatat
ataaaaacacctttaggtaatattatgcatacaggtgattggaagctagataatagccct
gtcactggagaaaaaactgatatggaatcattggaatctgctgcaaaagatggaatatta
gctgctgtatctgactcaacaaatgctatgacttatggagagactgtatctgaagaaact
gttaaagagtctattaatgaagtactatcaaaagttgatagaaaaaaccgtatagttatt
ggttgcttctcatcaaatgtttctaggatagattcatgtgctagattagcacaaaaatat
ggaagaaaagttgcgttagttggaagatccatccataaaatcaaagaatcagcttatgag
catgggtattttgctaacttacctgaatttttaactgaagaagaaggattcaaaacatct
aaagataaaattttatttatttgcacaggatcacaaggggaaacaaactctggactaaaa
agaatgtctgaaaatgaccaccctagaattaaattagataaaagtgacacggttatagtt
tcagctaaaactattataggaagagaaaaagaagtatcaggaatgttgaataattttgca
agaaataatgtaaaagtaattacatattctgaagatgcacctatacatgcatcaggtcat
cctgtaagatcagatctaaagaaattatatacattattaaagcctaaatttttaattcct
gttcatggagaaagattacatcaaaatgcccatgctgaacttggaaaagaaatgggaata
gagcctgctgttataaagaatggtgatatattaaaaattgaacaatctagcatgaaaatc
attaataactttcctatctctaaatctgtattagatggtaaggtagtggttccatatgat
ggaaaaaccatgactgaaagatattggttagaaaatggatgtattttcgtgagcatacta
attggaaacagaggatatttcaaattaatagcaacattttcaggaatatgtgagcaggat
gatattttaagagacaaagtaaaagaaagaattaaaactgctattatgtcattaaaccag
gatgatagaaaagttcaaaagaaacttgcaagcgttattaggaaagcaattaggtatgta
atgtttgaattaagaggaaaagatcctgctgtatttatccattcaactattttggacaaa
aaacctgcatctccaaaagaagaaaaagaaggggtacaaattgacattgatgaagaaaga
gaatctgattcattaggagattga

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