Entry |
|
Symbol |
polC_1
|
Name |
(GenBank) DNA polymerase III PolC-type
|
KO |
K03763 | DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] |
|
Organism |
cpro Anaerotignum propionicum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cpro00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPRO_15590 (polC_1)
03430 Mismatch repair
CPRO_15590 (polC_1)
03440 Homologous recombination
CPRO_15590 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cpro03032]
CPRO_15590 (polC_1)
03400 DNA repair and recombination proteins [BR:cpro03400]
CPRO_15590 (polC_1)
Enzymes [BR:cpro01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPRO_15590 (polC_1)
DNA replication proteins [BR:cpro03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPRO_15590 (polC_1)
DNA repair and recombination proteins [BR:cpro03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPRO_15590 (polC_1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1598653..1602984)
|
AA seq |
1443 aa
MTIQSFQQVFQKISLSVGVKETFCDTEVKKLTIYKKDRSVDVKIVSPKLIPLQESEQLKT
ELRQALPGIKEVRLSLEYVLNEIDDEHFLSIYWDNIKEFISQQSKICSGVISDAVWKYKD
GKLYIHVKNNMAYFMAQKKLDIELQKLIEKETGRLILTQFKNAITSEQETKLFEQAKEER
AAEFIQKIVAAQTAAEQEKSAAVAAGVSDSVQKGILFGKECVGAKIPISESKMIGETVVI
EGSIFNVESREIKGEKYIISFDITDKTDSTTVKFFVKKSIYDGELQDRFKMGAFLRVQGD
VQFDKYAREMNIMAKNINLAQAPPTRMDTMEEKRVELHLHTQMSSMDGVTPVKNYIKRAI
DWGHKAIAITDHGVVQAFPDAMNAAGKSDLKVIYGVEAYLVDDLGNVVTMSRGQKLNETF
VVFDIETTGLSRETEMITEIGAVKLEDGKIIDRFSTFVNPGKPISAEITKLTGITDEMVA
DAPKIKEVLPEFLEFAKDAVLVAHNASFDMGFIRVAAERYCQIEVEHTVLDTLELARALL
PQLNKHKLNILCDHLNISLVGHHRAVNDAEATAEMFLKFIDMLAEKNVSTLDEINIFSSR
TVNYKKLRAHHAIILVQNYTGLRNLYELVSLSHIDYFYRRPRIPKSQLLRLREGLILGSA
CEAGEIYRALLDNAPKEVIENLVGLYDYLEIQPLGNNNFMIESPRVESIRSVEDLKKMNQ
KIVSLGEKYHKPVVATCDVHFIDPDDQVYRKIIMAAEGFSDADNQPPLYFRTTEEMLKEF
QYLGEEKAREVVITNTNRIADCIEKIKPIPDETFPPKIEGADDELRRICMDKAHSLYGEP
LPPIVQDRLETELNSIISNGYAVLYIIAQKLVWKSVEDGYLVGSRGSVGSSFAANMAGIT
EVNSLPPHYVCPNCKYSDFDSETVKAYALEEACGCDMPDKVCPNCGEKLHKDGHDIPFQT
FLGFEGDKEPDIDLNFSGEYQQSAHAYTEELFGTGHVFKAGTIGTLADKTAYGFVKKYFD
ERQQTVHNAEINRLILGCTGVKRTTGQHPGGLMVVPNDHSIYEFCPIQRPANDVNSKITT
THFDYHSISGRLLKLDLLGHDDPTVIRMLYDLTGVNPQTVPLGDPETMSLFESPHALGVT
EEDINCKTGTLGIPEFGTKFVRGMLLDTKPKSFADLLRISGLSHGTDVWLGNAQSLIENG
TITLKETISTRDSIMIYLINKGVDKKKSFKIMEKVRKGKGLTEEDIADMKASQVPDWYIE
SCQKIKYMFPKAHAAAYVMMAFRIAYFKIHYPEAYYAAYFTVRASDDFDYATMCKGMEKA
KEAIKEIQAKGMEATAKDKNKMTVLEIIVEFYARGFHFLPIDLYKSDSKKFIITEDGMIP
PFNSLQGLGTTAAESIVEGRKEGEFHTLEELKNRTTLGRSLIDLLKENGVLNGIPETNQL
SLF |
NT seq |
4332 nt +upstreamnt +downstreamnt
gtgacaatacaaagttttcaacaagtatttcaaaagatttctttgtctgtgggcgtaaaa
gaaactttttgcgatacagaagtaaaaaagttaaccatatataaaaaagatcgctctgtg
gatgtaaaaattgtatcgcctaagctgatccctttacaagaatcagaacaattaaaaacg
gagctacgacaagcacttcccggtattaaagaggttcgcttgtctttagaatatgtatta
aatgaaattgatgatgagcattttttatccatctattgggataatataaaagaatttatt
tctcaacaaagcaaaatatgttctggtgttatttcagatgcagtttggaaatataaagac
ggcaagttatatatccacgtaaaaaataacatggcatattttatggctcaaaagaagcta
gatatagaattacagaagttgattgaaaaagaaaccggacgattgattcttacccaattt
aaaaatgcaattacttctgaacaagaaaccaaattatttgaacaggcaaaggaagaaaga
gccgctgagtttattcagaaaatagttgctgcgcaaacggcggcagagcaagaaaagtca
gccgccgtggcggcgggtgtttccgattctgttcaaaagggaatcttatttgggaaagaa
tgcgttggggcgaaaatacctatatctgaaagtaaaatgattggtgaaacagttgttatt
gaaggcagtattttcaatgtggagagcagagagattaaaggagaaaaatatatcatttcc
tttgatattacagataaaacagactcaactacagtcaaattctttgtaaagaaaagtatt
tatgacggtgagcttcaggatcgctttaaaatgggcgcatttttaagagtgcaaggtgac
gttcaatttgataagtatgcccgagaaatgaatattatggcaaagaatattaatcttgca
caagctccccctaccagaatggatacgatggaagagaaaagagtagagctccatttacat
acccaaatgagtagcatggacggtgtaactccggtaaaaaattatataaagcgtgctata
gattggggacataaagcaattgccataactgaccatggtgttgtacaggcctttcctgat
gccatgaacgccgcaggcaagtccgatttaaaagtaatttacggtgtggaagcatatttg
gtggatgaccttggcaatgtagttaccatgtctaggggacaaaagctcaacgaaaccttc
gttgtttttgatattgaaacaacggggctttccagagaaacagaaatgattacggaaatt
ggtgccgtaaaattagaagatggaaaaattatagatcgattcagtacctttgtgaatccc
ggaaaacccatttccgcagaaattacaaagctaacgggcattaccgatgaaatggttgca
gatgctcctaaaataaaagaagtattgccggaatttttagaattcgcaaaggatgctgtt
ttggtggctcataatgccagctttgatatgggttttattcgggttgcggcggagagatat
tgtcaaattgaggtggagcatactgtcttagatacactggaactggccagagccttactg
ccccagctgaataagcataagcttaatattctttgtgaccatttgaatatttctctggtg
gggcatcatagagctgtaaacgatgctgaggctacagcagaaatgtttctgaaatttatt
gatatgttggcagaaaaaaatgtttctacactggatgagattaatatattttccagccga
acggttaattataaaaagctccgtgctcatcatgctattattttggtacaaaattatacg
ggcttacggaacttatatgaattggtttccttgtcccatattgattatttttatcgaaga
ccccgtattcccaaaagtcagcttttgcgtctaagggaaggtttgattttaggcagtgcc
tgtgaggcaggagagatttaccgagctctattagacaatgcacccaaagaggttatagaa
aaccttgtaggcctttatgactatttggagatacaacccctagggaataacaactttatg
attgagtccccaagggtggaatccatacgttctgtggaagatttgaagaaaatgaatcaa
aaaattgtttccttgggagagaaatatcataaacctgttgttgctacctgcgatgttcat
tttatcgatcctgatgatcaggtttatcgaaaaatcattatggcggcagaaggtttttcc
gatgcggataaccagccacctttatattttcgtaccacggaagagatgttgaaagaattt
cagtatctaggggaggaaaaggcaagagaagtggttatcaccaatacaaatcgcattgcc
gattgtattgaaaaaatcaagcccatacctgatgaaaccttcccgcctaaaattgaaggg
gcggatgatgaattaagacgtatttgtatggataaagcccattctttatatggtgagccc
ttaccacccatcgttcaagaccgtttggaaacagaactaaattctatcatcagtaatggt
tatgcggtactttatatcattgcccaaaagctggtatggaaatccgtagaggatgggtat
ttggttggttcccgtggctcggtaggttcttcttttgcggcgaatatggcggggattaca
gaggtaaattccttgcctccccattatgtgtgcccaaactgcaaatattcggattttgat
tctgaaacggtaaaggcttatgcattggaggaagcttgtgggtgtgatatgccggataag
gtatgtccaaattgcggcgaaaagcttcataaggatggacatgacattcccttccaaacc
tttcttggatttgaaggagataaggaaccggatattgacttaaatttttcaggggaatac
cagcagagtgcccatgcctatacagaagagctttttggaacaggacatgtttttaaggca
gggaccattggtacccttgccgataaaactgcctatggctttgtaaaaaaatattttgat
gagcgtcaacagacggtgcataatgcagaaataaaccgtttgatattgggttgtacagga
gtaaaaagaaccacaggacagcatcccggaggtttaatggtagtacccaacgaccatagt
atatacgagttttgcccaattcagcgacctgctaatgatgtaaactctaaaattaccaca
actcattttgattatcattccatcagtggacgtttgctgaagcttgaccttttggggcac
gacgatcctacggtaattcgtatgctttacgatttaaccggggtaaatccacaaacggta
ccccttggtgatccggagactatgtctctgtttgagtctccacatgctttgggggttacg
gaggaggatatcaattgtaaaacagggacactgggcataccggagttcgggacaaaattt
gttcgtggcatgcttttggatacaaaaccaaagtcttttgctgatttattgcgtatttca
gggctttcccatggtactgatgtatggcttggcaacgctcagtccttaatcgaaaatggc
accatcactttgaaagaaaccatttctactcgagatagtattatgatttatctgataaat
aaaggtgtagataaaaagaaatcgtttaaaattatggagaaggtacgtaaagggaagggc
ttgacggaggaagacattgctgatatgaaagcctctcaagtacccgactggtatattgaa
tcttgccaaaagattaagtatatgttccctaaggcccatgcggctgcctatgttatgatg
gctttccgcattgcttattttaaaattcactatcctgaggcatattatgcggcatacttt
acagtaagagccagtgatgattttgattatgcaaccatgtgtaaagggatggaaaaggcg
aaagaagcaatcaaggagattcaggcaaaaggaatggaagcaacagccaaggataaaaat
aaaatgactgttttagaaattatcgttgagttttatgccagagggtttcacttcctgccc
attgatctttataaatcggatagcaaaaaattcatcattacagaggacgggatgatacct
ccctttaactccttgcagggcttaggtaccactgcggctgaaagtattgttgaaggcagg
aaagaaggggagttccataccttagaggagttgaaaaaccgaaccaccttgggtcgatct
ctcatagaccttttaaaggaaaatggtgttttaaacggtattcccgaaacgaatcagctt
agcttgttttga |