Anaerotignum propionicum: CPRO_28940
Help
Entry
CPRO_28940 CDS
T04574
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cpro
Anaerotignum propionicum
Pathway
cpro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPRO_28940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpro03021
]
CPRO_28940
03019 Messenger RNA biogenesis [BR:
cpro03019
]
CPRO_28940
Transcription machinery [BR:
cpro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CPRO_28940
Messenger RNA biogenesis [BR:
cpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPRO_28940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
AAA_25
ATPase_2
AAA_22
AAA_14
ResIII
AAA_24
NACHT
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
AMJ42427
UniProt:
A0A120MKI9
LinkDB
All DBs
Position
complement(2989913..2991346)
Genome browser
AA seq
477 aa
AA seq
DB search
MENDLQKKTLAELREMAREMDVKSISSLKKSELIEKISEKQSQAERVAVKRVTAYGFSLQ
ENQEPVKKPETPIEGKDEGYTHRERVVQREEKATVMENSVPGEGILEVMPDGFGFLRTQN
FLPGAGDIYVSPSQIRRFNLKTGDAVKGNIRTAREGEKFGALLFVKSVNGDFPDQAAKRP
NFEDLTPIYPEEKLHFEVSREELSGRIIDLCAPIGKGQRGMIVAPPKVGKTVLLTQMANA
LTKNHKEVHLIVLLIDERPEEVTDIQRSIEGENVQIVYSTFDEQPEHHKRVTEMVLERAK
RLVEQGKDLVILLDSLTRLARAYNLTIPPSGRTLSGGLDPAALYMPKRFFGAARNIENGG
SLTILATALVDTGSKMDEVVFEEFKGTGNMELVLDRRLSERRIFPAVDINKSGTRREEKL
LTEQELECNFTLRKMASTMSQMEMVEGFYDLMRKTKNNQEFMERLPFWEKTLGLFDK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgatctgcagaaaaaaactctggcagaattgagagagatggcgagggaaatg
gatgttaagtccatttcctctcttaaaaaaagtgaattgattgaaaagatatcagaaaag
cagtctcaggcggaacgtgttgccgttaagcgtgtgactgcttatggtttttctctgcag
gagaatcaggagccggtgaaaaaacccgaaacgcccattgaggggaaagacgagggttat
acccacagggaaagagtagtccaaagggaagaaaaggctacggtaatggaaaacagcgta
cccggcgagggaatactggaggtaatgcccgatgggtttggcttccttagaacgcagaat
tttcttcccggggctggagatatttatgtgtctccttcccaaattagaaggtttaatcta
aaaacaggggacgcagtgaaaggaaatattcgaacagctagggagggcgagaagtttggt
gcccttttattcgtaaaatcggtcaacggagatttccctgatcaggcggcgaaacgcccc
aattttgaggatttaacacccatttaccctgaagaaaagctgcactttgaggttagccga
gaggagctttcgggaagaattatcgatctctgtgcccccattggtaagggacaaagagga
atgattgtggcacctcctaaggtgggtaaaactgttcttttgacacaaatggctaatgcc
ctaacaaaaaaccacaaagaagtacatcttatcgtacttttgattgatgaacgccctgaa
gaagtaacagatattcagcgctccattgaaggtgagaatgttcagatagtatactctacc
tttgatgaacagcccgagcaccataaacgagtgacggagatggttttggaaagagcaaag
cgtctcgtggagcaagggaaagacttggttattctgttagacagcttaacaagattggcc
agagcctacaacttgaccattccgcccagcggcagaaccctttccggcggtttggatccc
gcggcattgtatatgccaaagcgtttcttcggtgctgcccgaaacattgaaaatgggggc
agcttaaccatattggcaacggcgctggtggatacgggaagtaaaatggacgaggttgtc
tttgaagaatttaagggtacaggcaatatggaattggtgctagatagaagactttctgag
cggcgtattttccccgcggtagatattaacaagtcagggacaagacgagaagagaagctt
ctgaccgagcaagagttggaatgcaactttaccctaaggaaaatggcatctaccatgagc
cagatggagatggtagaaggcttttatgatttgatgaggaagaccaaaaataaccaagag
tttatggagcgcttacccttctgggaaaagaccttggggctgtttgataagtga
DBGET
integrated database retrieval system
