Cellulosimicrobium protaetiae: FIC82_012110
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Entry
FIC82_012110 CDS
T08736
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cprt
Cellulosimicrobium protaetiae
Pathway
cprt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cprt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIC82_012110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cprt03019
]
FIC82_012110
03009 Ribosome biogenesis [BR:
cprt03009
]
FIC82_012110
Enzymes [BR:
cprt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FIC82_012110
Messenger RNA biogenesis [BR:
cprt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FIC82_012110
Ribosome biogenesis [BR:
cprt03009
]
Prokaryotic type
rRNA helicases
FIC82_012110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Flavi_DEAD
FKRP_N
adh_short
CMS1
Motif
Other DBs
NCBI-ProteinID:
QJW36823
UniProt:
A0A6M5UHX4
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All DBs
Position
2855172..2857058
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AA seq
628 aa
AA seq
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MTADVVAPSHALDHSTDTPTRPEPTGPVFADLGLPAPLERAVADLGFVTPSAIQAEAIPA
LLAGRDITGVAQTGTGKTAAFGLPLLAAIDPAERRVQAVVLTPTRELAMQVADAVESFAA
HLPKVDVVAVYGGSPYQPQQRALAAGAQVVVGTPGRVIDHIERGTLVLDDVRFLVLDEAD
EMLRMGFAEDVDTIFSRAPRERQVALFSATMPAPIRRVANEHLTDPVEIAVARQSSTVTS
VRQTYAVVPFRHKTGSLVRVLATSDAEAAIVFTRTRGAAEEVGSALVERGISAATISGDV
AQKERERIVERLRAGALDVLVATDVAARGLDVDRIGLVVNFDLPGEPEAYVHRIGRTGRA
GRTGEALSFVTPHERGRLRAIERTTRTPLQEVEIPSPADVSAHKVRALLGQVPARLEAGR
LSMYADVVRTFLAEHDVDPVDLAAAMAALAVGDDGPRAREEQERFEAERAAAREQAKARR
TERTGERPRGERASGRREGDGTRGIRRDAVGTRYRLSVGHKDGVMPGGIVGALTNEAGLA
GSDVGKIDIFPSFSLVDITAPLDAETMDRISRARVAGKALRIRLDEGAPASRGPRGGHGP
SGRRDERRDRFDRADDRGERKPRHRAAY
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgtcgtcgcgccctcgcacgccctcgaccactccaccgacacccccacc
cgccccgagccgaccggccccgtgttcgccgacctcggcctgcccgcgccgctcgagcgc
gccgtcgccgacctcgggttcgtcacaccgtccgcgatccaggccgaggccatccccgcg
ctcctcgccggccgcgacatcaccggcgtcgcccagacgggcaccggcaagaccgccgcg
ttcggcctgccgctcctcgcggcgatcgaccccgccgagcgccgcgtgcaggccgtcgtc
ctgaccccgacgcgcgagctcgcgatgcaggtcgccgacgccgtcgagtcgttcgcggcc
cacctgcccaaggtcgacgtcgtcgccgtgtacggcggctccccgtaccagccgcagcag
cgggcgctcgcggccggcgcgcaggtcgtcgtcggcacgcccgggcgcgtcatcgaccac
atcgagcgcggcaccctcgtgctcgacgacgtgcgcttcctcgtgctcgacgaggccgac
gagatgctgcgcatgggcttcgcggaggacgtcgacacgatcttctcccgcgcgccgcgc
gagcgtcaggtcgccctgttctccgcgacgatgcccgccccgatccgccgggtcgcgaac
gagcacctcaccgacccggtcgagatcgccgtcgcccggcagtcgtccacggtgacgagc
gtgcgccagacgtacgccgtcgtcccgttccggcacaagaccggctcgctcgtgcgcgtc
ctcgcgacgtccgacgcggaggccgcgatcgtgttcacccgcacgcgcggcgcggccgag
gaggtcgggtccgcgctcgtcgagcgcggcatctccgccgccaccatctcgggcgacgtc
gcgcagaaggagcgcgagcggatcgtcgagcgcctgcgcgccggcgcgctcgacgtcctc
gtcgcgaccgacgtcgccgcgcgcggcctcgacgtggaccgcatcggcctcgtcgtgaac
ttcgacctgcccggggagcccgaggcgtacgtgcaccgcatcggtcgcaccggccgcgcc
gggcgcaccggcgaggccctgagcttcgtcaccccgcacgagcgcggccgcctgcgcgcg
atcgagcgcaccacccgcaccccgctgcaggaggtggagatcccctcccccgccgacgtg
tccgcgcacaaggtccgcgccctcctcggccaggttcccgcgcgcctcgaggccggccgc
ctgtccatgtacgccgacgtggtgcgcaccttcctcgccgagcacgacgtcgaccccgtc
gacctcgccgcggccatggcggcgctcgcggtcggcgacgacggcccgcgtgctcgcgag
gagcaggagcggttcgaggccgagcgcgccgcggcgcgcgagcaggcgaaggcgcgccgc
accgagcgcacgggcgagcgtccgcgcggcgagcgcgcgtcgggccgtcgcgagggcgac
ggcacgcgcggcatccgccgtgacgccgtcggcacccgctaccgcctgtccgtgggccac
aaggacggcgtgatgcccggcgggatcgtcggcgcgctgacgaacgaggccggcctggcc
gggtcggacgtcgggaagatcgacatcttcccgtccttctccctcgtggacatcaccgcc
ccgctggacgcggagacgatggaccgcatctcccgcgcccgcgtcgccggcaaggcgctg
cgcatccgcctggatgagggcgcgcccgcgtcgcgcgggccccgcggcgggcacggcccg
tcgggccgtcgcgacgagcgccgcgaccgcttcgaccgggccgacgaccggggcgagcgc
aagccccgtcaccgcgccgcgtactga
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