Cellulosimicrobium protaetiae: FIC82_014300
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Entry
FIC82_014300 CDS
T08736
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cprt
Cellulosimicrobium protaetiae
Brite
KEGG Orthology (KO) [BR:
cprt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cprt03032
]
FIC82_014300
03400 DNA repair and recombination proteins [BR:
cprt03400
]
FIC82_014300
Enzymes [BR:
cprt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIC82_014300
DNA replication proteins [BR:
cprt03032
]
Prokaryotic type
DNA Topoisomerases
FIC82_014300
DNA repair and recombination proteins [BR:
cprt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIC82_014300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
QJW37182
UniProt:
A0A6M5UI19
LinkDB
All DBs
Position
3328170..3329156
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AA seq
328 aa
AA seq
DB search
MRLRRVSVTSPGYSRRPKGEEWVFLDVEGLPLTDDDEVARCARLAVPPAWQDVWICRYPN
GHVQAFGRDAAGRGQYLYHEQWQARRARRKHDHVLDVGRRLPAARRRVARDLAEPGIGRE
KVLALAFRLLDLAYFRAGGEIYAQQNRSYGLATIRKEHARVRRDGSVHFHYPAKSGQVRD
VVVDDPVVAELTTTLKRRRGGVELLAWREDGADGHAAWHDVTSADVQAGIKERLGDDATP
KDFRTWHATVLAARALADAGAAPASDRARRRVVTGIVKDVAEELGNTPAVARSSYIDPRL
FDLWERGETIGSTRSQTRAEREVLELLA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcgactgcgccgcgtgtccgtgacctcccccggctactcccgccgcccgaagggcgag
gagtgggtgttcctcgacgtcgaggggctgcccctgaccgacgacgacgaggtcgcgcgc
tgcgcgcggctcgcggtgccgcccgcgtggcaggacgtgtggatctgccgctacccgaac
gggcacgtccaggcgttcggccgcgacgcggccggacgagggcagtacctgtaccacgag
cagtggcaggcgcgccgggcgcggcgcaagcacgaccacgtgctcgacgtcggccgtcgc
ctgcccgccgcccggcgccgggtcgcgcgcgacctcgccgagcccgggatcggccgcgag
aaggtgctcgccctcgcgttccggctgctcgacctcgcgtacttccgtgcgggcggggag
atctacgcccagcagaacaggagctacggcctggcgacgatccgcaaggagcacgcccgg
gtccgccgcgacgggagcgtgcacttccactaccccgcgaagtcgggccaggtgcgcgac
gtcgtcgtggacgacccggtggtcgccgagctcaccacgaccctcaagcggcggcgcggc
ggcgtcgagctgctcgcgtggcgcgaggacggcgccgacgggcacgccgcgtggcacgac
gtcacgagcgccgacgtccaggcgggcatcaaggagcggctcggcgacgacgcgacgccc
aaggacttccgcacgtggcacgcgaccgtcctcgcggcgcgcgcgctcgccgacgccggg
gcggcgcccgcctcggaccgggcacggcgccgggtcgtcacggggatcgtcaaggacgtc
gcggaggagctggggaacacgcccgccgtcgcgcggtcctcgtacatcgacccgaggctg
ttcgacctgtgggagcgcggcgagacgatcggctcgacgcgctcgcagacgcgcgccgag
cgcgaggtcctggagctgctcgcgtga
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