Cellulosimicrobium protaetiae: FIC82_016160
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Entry
FIC82_016160 CDS
T08736
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cprt
Cellulosimicrobium protaetiae
Pathway
cprt00020
Citrate cycle (TCA cycle)
cprt00640
Propanoate metabolism
cprt00660
C5-Branched dibasic acid metabolism
cprt00720
Other carbon fixation pathways
cprt01100
Metabolic pathways
cprt01110
Biosynthesis of secondary metabolites
cprt01120
Microbial metabolism in diverse environments
cprt01200
Carbon metabolism
Module
cprt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cprt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cprt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FIC82_016160 (sucD)
00640 Propanoate metabolism
FIC82_016160 (sucD)
00660 C5-Branched dibasic acid metabolism
FIC82_016160 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
FIC82_016160 (sucD)
Enzymes [BR:
cprt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FIC82_016160 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
DapB_N
Mrr_cat
Motif
Other DBs
NCBI-ProteinID:
QJW37486
UniProt:
A0A6M5UG13
LinkDB
All DBs
Position
complement(3760971..3761861)
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AA seq
296 aa
AA seq
DB search
MSIYLNSDSKIIVQGITGGMGAKHTALMLDSGAQIVGGVNARKAGTTVTHKDHEGNDVTL
PVFGTVAEAMAETGANVSVLFVPPAFTKDAAIEAIDAEMPLIVVITEGVPVQDTAEVWAY
LQGKKTRMIGPNCPGIITPGESLAGITPHTITGKGPVGLVSKSGTLTYQMMYELKDLGFS
TAIGIGGDPIVGTTHIDALEAFENDPETKAIVMIGEIGGDAEERAAAYIKDHVTKPVVGY
VAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAVGVKVGKTPSETAALLREVLA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctacctgaactccgactccaagatcatcgtccagggcatcaccggcgggatg
ggtgccaagcacaccgccctcatgctcgactcgggcgcgcagatcgtcggcggcgtcaac
gcccgcaaggccgggacgaccgtcacgcacaaggaccacgagggcaacgacgtcacgctc
cccgtgttcgggaccgtggccgaggccatggccgagacgggcgcgaacgtgtccgtcctg
ttcgtcccgccggcgttcaccaaggacgccgcgatcgaggcgatcgacgccgagatgccg
ctcatcgtcgtcatcaccgagggcgtgcccgtccaggacacggccgaggtctgggcctac
ctccagggcaagaagacgcgcatgatcggcccgaactgccccggcatcatcacgccgggc
gagtcgctcgccggcatcaccccgcacaccatcacgggcaagggcccggtcggtctcgtg
tcgaagtcgggcacgctgacctaccagatgatgtacgagctcaaggacctcgggttctcg
accgccatcggcatcggcggcgacccgatcgtcggcaccacgcacatcgacgcgctcgag
gcgttcgagaacgaccccgagaccaaggccatcgtcatgatcggcgagatcggcggcgac
gccgaggagcgtgcggcggcctacatcaaggaccacgtcacgaagccggtcgtcggctac
gtcgcgggcttcaccgcccccgagggcaagacgatgggccacgccggcgcgatcgtctcc
ggctccgcgggcaccgcgcaggccaagaaggaggccctcgaggccgtcggcgtcaaggtc
ggcaagacgccgtccgagaccgccgcgctgctgcgcgaggtcctcgcctga
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