Cellulosimicrobium protaetiae: FIC82_016585
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Entry
FIC82_016585 CDS
T08736
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cprt
Cellulosimicrobium protaetiae
Pathway
cprt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cprt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIC82_016585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cprt03021
]
FIC82_016585
03400 DNA repair and recombination proteins [BR:
cprt03400
]
FIC82_016585
Enzymes [BR:
cprt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIC82_016585
Transcription machinery [BR:
cprt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIC82_016585
DNA repair and recombination proteins [BR:
cprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIC82_016585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QJW37554
UniProt:
A0A6M5UHE4
LinkDB
All DBs
Position
complement(3854545..3855564)
Genome browser
AA seq
339 aa
AA seq
DB search
MLIAQRPTLTEEVISENRSRFSIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEVILNIKNLVVSSENDEPVVMYLRKQGAGAVTAADIVPPAGVEVHN
PELHIATLNDKGKLEIELTVERGRGYVSASQNKSFDAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVVDVETKPAISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
AALAADLALPIEELNLTIRSYNCLKREGIHQVGELVARSEADLLDIRNFGAKSINEVKEK
LAELGLSLKDSPLDFDPSAAAYYDGDDDEATFSDTEQQY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgccccaccttgaccgaagaggtcatctcggagaaccgttcgcgc
ttctccatcgagcccctggagccgggcttcggctacacgctcggcaactcgctgcgtcgc
acgctgctgtcgtccatcccgggcgcggcggtcacctccatccgcatcgacggtgtgctc
cacgagttcaccaccgtgccgggtgtgaaggaggacgtgaccgaggtcatcctcaacatc
aagaacctcgtcgtctcctcggagaacgacgagcccgtcgtgatgtacctgcgcaagcag
ggtgctggtgcggtcaccgcggcggacatcgtcccgcccgcgggtgtggaggtccacaac
cccgagctgcacatcgccacgctcaacgacaagggcaagctcgagatcgagctgaccgtc
gagcgcggccgtggctacgtctcggcgtcgcagaacaagtcgttcgacgcggagatcggc
cggatcccggtcgactcgatctactcgcccgtcctcaaggtgacctacaaggtcgaggcg
acgcgtgtcgagcagcgcacggacttcgacaagctggtcgtggacgtcgagacgaagccg
gcgatctcgccgcgcgacgcgctcgcgtcggcgggcaagacgctggtggagctcttcggc
ctggcccgtgagctcaacgtcgaggccgagggcatcgagatcggcccgtcgccgacggac
gcggccctggccgcggacctggcgctgccgatcgaggagctcaacctcacgatccgctcg
tacaactgcctcaagcgcgagggcatccaccaggtgggcgagctcgtcgcacgcagcgag
gcggacctgctggacatccgcaacttcggtgcgaagtccatcaacgaggtgaaggagaag
ctcgccgagctcggcctgtccctcaaggactcgccgctcgacttcgacccgtcggccgcc
gcgtactacgacggcgacgacgacgaggcgacgttctcggacaccgagcagcagtactga
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