| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
cprv Cyclonatronum proteinivorum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cprv00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYPRO_1021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cprv03021]
CYPRO_1021
03400 DNA repair and recombination proteins [BR:cprv03400]
CYPRO_1021
Enzymes [BR:cprv01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYPRO_1021
Transcription machinery [BR:cprv03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYPRO_1021
DNA repair and recombination proteins [BR:cprv03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYPRO_1021
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1264665..1268954
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| AA seq |
1429 aa
MSHTVSDTVSKDFKSIKISLASAETILSRSRGEVLTPETINYRTFKPEMNGLFCEKIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTRKAVRRERMGHLSLCVPVVHIWYFKSLPNKV
AYLLGLSSKNLDKIVYYENFVVINPGMARDLGYKYGDMITEEEYFDIMRQLPEEHSELDD
DDSDKFSAKMGAEAVEAMLANIDLEKDIYKYREQAKNETSMLRKKKTLKRLQVLEAFRAA
NKSISNRPEWMVMRVIPVIPPELRPLVPLEGGRFATSDLNDLYRRVIIRNNRLKRLIDIK
APDVILRNEKRMLQEAVDSLFDNSRKTNAVRNNNRPLKSLSDMLKGKGGRFRQNLLGKRV
DYSGRSVIVVGPELKMHQCGLPKEMAIELYKPFVIRRLIERGYVKTVKSAKKMVDRRDEV
IWDVLENVIKGHPVLLNRAPTLHRLGIQAFQPILIEHKAIQLHPLACTAFNADFDGDQMA
VHLPLSNDAILEASVLMLGAHNILNPASGGPITVPSQDMILGLYYMTKVGPSSETDEKTF
ASPDEVVVAFDQDKLNLHNRIKVRLRAGIDGVEENEVIATTAGRVLFNEIIPNEIGFKNL
TFGKKELRILIGEVFNAVGTARTAQFLDDMKYLGFENATRGGLSFSLEDIVIPETKAELI
EKAQHEVRMIQDRYDNGFITDNERYNQVIDKWTSTTNRVSETLFNALANDKQGFNSVFMM
ADSGARGSKEQIRQLGGMRGLMAKPQKSSLESSGSEVIETPILSSFKEGLTVLEYFISTH
GARKGLADTALKTADAGYLTRRLVDVSQDVVVTEHDCGTLRGIRISALKDNEDIVESLED
RIVGRTSMHDIYDPLTDELLVRSNQLITEHIARQIAQTSIEEVEIRSVLTCESSRGVCSM
CYGRDLTRGKLVQTGEAVGVIAAQSIGEPGTQLTLRTFHVGGTAARLEAESQHKAKFNGK
VEFDNLRVVDYNDGEEEVSVVLSRGSEIKIVDETGKVLNTHTVPYGSEMLVEDGDMVMKG
QPLCKWDPYNARIYSEMNGTVTFKDIIDDVTATDESDAQTGFKEKVIIDSKDRTLVPTLI
INDGTRDKEIPLPVRTHIVVDDGDSVAAGQVIAKIPRKAAKSKDITAGLPRVTELFEARP
PSDPATVSEIDGIVKFGNRKRGSQEIIVTSKDGVDQRTYLIPLSKHILVQENDFVTAGQP
MSEGAILPQDILNILGPFAVQSYIVNEIQEVYRLQGVKINDKHIEIIVRTMMQKVEITEP
GDTMYLEGDKVDRFEVARTNDSLIGKFVVTDAGGSDLTLGTLLTRREVREINSQLIKEDK
PEMEVREAESAISRPILLGITRAALSTDSWLSAASFQETTKVLTSAAVEGKSDYLLGLKE
NVVVGHRVPAGTGMRTYQNLIVGPMQTHTESSEAEERSKSIADILRSEN |
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| NT seq |
4290 nt +upstreamnt +downstreamnt
ttgtcacatactgtaagcgacaccgtttccaaagatttcaagtcaattaaaatttccctg
gcgtcggcagaaactattctgtcccgatccagaggagaagtacttacacctgaaaccatt
aattatcgtacgttcaagccggaaatgaatggcttgttctgtgagaaaatttttggcccg
gtcaaagactgggagtgccactgcggtaaatacaagcgcattcggtacaagggtattata
tgcgaccgctgcggggttgaagtaacccgtaaagcagtgcgccgtgagcgtatggggcac
ctgagtttgtgtgtacccgtagttcatatctggtacttcaagtcactgcctaacaaagta
gcttatctgttgggcctttcatccaaaaacctggataaaattgtttattacgaaaatttc
gtagtaatcaatccgggcatggcgcgtgatcttggttacaagtatggcgacatgattacc
gaagaagagtacttcgatatcatgcgtcagcttcccgaagagcacagcgaacttgatgat
gacgattcagataagttcagtgccaagatgggggcagaagctgttgaagctatgctggcc
aacatcgatctggaaaaggatatttacaaataccgcgagcaggcgaaaaatgaaacgtca
atgctccggaaaaagaaaacgctgaagcgccttcaggtgcttgaggctttcagagcggcg
aataaatctatttccaaccgtccggagtggatggtgatgcgggttatccccgttatcccg
cccgaacttcgtccgcttgttccgcttgaagggggtcgctttgcaacatccgacctgaac
gacctgtaccgcagggtcatcattcgtaacaatcgtctgaagcgtctcattgacatcaaa
gcgccggatgtaattctgcgcaatgaaaaacgcatgcttcaggaagctgttgactctctc
tttgataattcacgcaagacgaatgcggtccgtaataacaaccggcccctgaagtcgctc
agcgatatgctcaaaggtaaaggcggtcgtttccgtcagaaccttctgggcaagcgtgtt
gactattccggtcgttcggtgattgtggtgggtccggaactgaaaatgcatcagtgcggt
ctgccgaaagaaatggccattgagctttataagccgtttgtaatccgacgcctgattgag
cgcggatacgttaaaacggtgaagagcgccaaaaaaatggttgaccgtcgggacgaggtt
atctgggatgttcttgaaaatgtgattaaaggacaccccgtattgctcaaccgtgcaccg
accctgcaccgtcttggtattcaggcatttcagccgatactgattgagcacaaagccatt
cagctccatccccttgcctgtaccgcgttcaacgctgacttcgacggcgatcagatggct
gttcaccttccgctgagcaatgacgctattcttgaagcgtctgtactcatgctgggtgcg
cacaacattctgaaccctgcaagtggcggacctatcaccgtaccatctcaggatatgatt
ttgggtctgtactacatgacaaaagtaggcccaagctcagaaaccgatgagaaaacattt
gcttcacctgatgaagtcgtcgtggcttttgatcaggataagctgaatcttcataaccgc
atcaaggtcagattacgtgccggtatagacggtgttgaagaaaatgaagtaattgcgaca
accgctggccgggtactctttaatgaaatcatcccgaatgagattggtttcaaaaacctg
acgttcggcaaaaaagagctccgcattcttatcggtgaggtgttcaacgctgtaggtacg
gcaagaaccgcacaattcctggacgacatgaagtatctcgggttcgaaaatgcaacccgt
ggtggtctttccttcagtctcgaagatattgtaatccctgaaaccaaggctgaacttatc
gaaaaggcacagcatgaagtgcgtatgattcaggatcgctatgataacggtttcattacc
gacaatgagcgttacaatcaggttatcgataagtggacaagcacaacgaaccgcgtatcg
gaaacgctgttcaatgcgctggcaaatgataagcagggtttcaactctgtattcatgatg
gctgactccggcgcacgtggttcgaaagaacaaatcaggcagcttggtggtatgcgtggt
ctgatggcgaagccgcaaaagagttcactcgagtcatctggaagcgaagttattgaaacg
cctattctttcttcctttaaggaaggtctcacggttctcgaatactttatttccacacac
ggtgcccgtaagggtcttgcagatacggcgcttaaaacagctgacgccggatatcttacc
cgccgtcttgtggatgtatcgcaggatgttgtcgtaaccgagcacgattgtggtaccctt
cgcggcatccggatttccgcccttaaggataacgaggacattgttgaaagccttgaagac
cgtatcgttggccggacttcaatgcatgatatctacgatcctttgacggatgagcttctc
gtacgctctaatcagctcatcaccgagcacattgcgcgtcagattgcgcaaacttccatc
gaagaagttgaaatccgttcggtgcttacctgtgagtcatcccgtggtgtttgctcgatg
tgctatggccgtgaccttacacgtggcaagcttgttcagaccggtgaagccgttggtgta
attgctgcgcagtcaatcggggaaccgggtacacagcttacgctgcgtacgttccacgtt
ggtggtactgccgcgcgtcttgaagcggaatcgcagcacaaagctaaatttaacggtaaa
gttgagtttgataaccttcgcgtggttgattacaacgacggcgaagaagaagtcagcgtt
gtactgagccgtggtagcgaaatcaaaatcgttgatgaaaccggaaaagtgctcaacacg
catacggttccctacggttctgaaatgcttgtcgaagatggcgatatggtcatgaaagga
caaccgctttgtaagtgggacccgtacaatgcccgtatttattccgaaatgaacggaacc
gttacgttcaaagatattatcgatgatgtaacggcgacggatgaaagtgatgcccaaacc
ggatttaaggaaaaggtaatcatcgacagtaaagaccgtacgctggtaccgacccttatc
atcaacgacggaacccgtgataaagaaattccgctgccggtacgtacccacattgttgtc
gatgacggtgacagtgttgcagcggggcaggttatcgcgaaaattccgcgtaaggcggct
aagtcgaaggatatcacggcaggtctgccacgggttaccgagctgtttgaagcccgtccg
ccaagcgatcccgctaccgtatctgagattgacggtatcgttaagtttggaaaccggaaa
cggggttcgcaggaaatcatcgtaacaagtaaagacggtgtggatcagcgcacgtatctg
attccgctctccaagcacattcttgttcaggaaaacgatttcgtgacagccggacagccg
atgtcagaaggcgcaattctgccacaggatattctgaatattctcgggccgtttgctgta
cagtcgtacattgtaaacgagattcaggaagtttaccgcctgcagggtgttaaaatcaat
gataagcacatcgagatcattgtacgcacgatgatgcagaaagtggagattaccgaaccc
ggtgataccatgtatctcgagggcgacaaagtggaccgcttcgaagttgcacgcaccaac
gacagcctgatcggtaagttcgtggttacggatgccggcggttctgatctgacgttgggt
acgctgctcacccgccgcgaagtgcgtgagattaactcacagcttatcaaagaggataaa
ccagagatggaagttcgcgaggctgaatcagcgatttcgcgtccgatactgctcggtatt
acccgcgcggcgctttcaactgacagctggctctcagcggcatctttccaggaaacgacg
aaagtgctaacgtctgcagcagttgaaggaaaatcagattatctgcttggccttaaagaa
aatgttgtggtcggacaccgcgtaccagctggtacaggtatgcgtacctatcaaaacctt
attgtgggtcctatgcaaacgcatacggaatcaagtgaggctgaagagagaagcaagtca
atcgctgatattcttcgctccgaaaactaa |
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