Cyclonatronum proteinivorum: CYPRO_1710
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Entry
CYPRO_1710 CDS
T05709
Name
(GenBank) RNAse R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
cprv
Cyclonatronum proteinivorum
Pathway
cprv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cprv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYPRO_1710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cprv03019
]
CYPRO_1710
03016 Transfer RNA biogenesis [BR:
cprv03016
]
CYPRO_1710
Enzymes [BR:
cprv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CYPRO_1710
Messenger RNA biogenesis [BR:
cprv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CYPRO_1710
Transfer RNA biogenesis [BR:
cprv03016
]
Prokaryotic type
tRNA degradation factors
CYPRO_1710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
RNase_II_C_S1
S1
OB_Dis3
OB_RNR_1st
Motif
Other DBs
NCBI-ProteinID:
AXJ00961
UniProt:
A0A345UKF9
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All DBs
Position
2187592..2189748
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AA seq
718 aa
AA seq
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MGKKKKVKELESFMLNFLRKNSSYEVPEELLLQTAQHTGGQVKALKRALNRLIDSGAVLR
NAKGELSLAKGGAAQAAKSEGLAGRISVNRHGTGFVSLEGYEEDVRIPSKKLGVALDRDI
VRIRLQGANRSGRTEGKVLDVVERGKKYYVGTLARENKHAWVIEPDEKSAHTTFFVQPEN
TGGGQSGDKVIFKLLDWVHPRSLPEAVVTEVLGAKGTNKAEVLSILAENDMISSFTPEVE
AWCDQIPLFPGEDEIARRRDIRDMLVFTIDPEDAKDFDDALSISKLDNGNYYLGVHIADV
TYYLHPKTVLDDAAHERATSVYLVDRVIPMLPEKLSNGVCSLRPNEDKMTYSCFMEVTPD
GEVRDYQIEETATHSKFRLTYEEAQEIIEGKNHPELSGPMEMLVKLTDRLTEKRFQENAI
DFESPEPRFVLDKTGKPVDVIIKKRFKAHRLIEECMLLANRTVAEHVDQLRQKSGKKITQ
DTFPFFYRIHAEPDTERLQQVADHVRPAGIKFDVRKGKVDAKSINNVLEQVKGKSIEYTV
NDLLLRSMAKAEYSPKNIGHFGLGFSHYAHFTSPIRRYPDVLVHRLLKSYTAGLPSYNFK
NLLTYGEHCSERERAAVTAERDSIKLKQVEYLSTRIGQEFDGVVSGVTERGIYVLLKDIY
CEGMVGMSDLDDDFYIYDKRRHCLTGRRKGRTYMLGNELKVRVVNTNLELRQIDFELA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagaagaaagtaaaagagctcgaatccttcatgctgaatttccttcgtaag
aacagctcttacgaagtgccggaagaacttttgctgcaaacagcgcagcacaccggcgga
caggttaaagcgctgaaaagggcgctgaaccgcttaattgattcaggtgcggtacttcgc
aatgccaaaggcgagctcagccttgccaaaggtggcgcggcacaggctgccaaatcagaa
gggcttgcgggccgcatttccgtgaaccggcacggtaccggctttgtttcgctggaaggc
tacgaagaagacgttcggattccttccaaaaagctgggggttgcccttgatcgggatatc
gttcggattcgcctgcagggtgcaaaccgcagcggacgtaccgaaggcaaagtgctggat
gtagttgagcgcggtaaaaaatattacgtgggaacacttgcgcgcgaaaacaagcatgca
tgggtcattgaaccggacgaaaagtcggcccacaccactttcttcgtgcagccggaaaat
accggtggcggtcagtcgggtgacaaagttatttttaaacttctggactgggtgcacccg
cgctcgctgcccgaagcggtagtgacggaagtgcttggcgccaagggcaccaataaggcg
gaagtactctccattctggctgaaaacgacatgatcagttctttcacgccggaagttgaa
gcctggtgtgatcagattccgcttttccccggcgaagatgaaatcgcacgccgccgcgac
atacgcgatatgctggttttcaccatcgatcccgaagacgcgaaagattttgatgacgcc
ctgagcatatcaaaactggataacggcaactattaccttggggtgcacattgctgatgta
acctactacctgcaccccaaaacagtgctcgacgacgcagcccacgaacgcgccacaagc
gtgtacctggttgaccgggtgattcccatgctgcccgaaaagctgagtaacggcgtatgc
agccttcggccaaacgaagataaaatgacgtacagctgttttatggaagttacgcctgat
ggcgaagtgcgggattatcagattgaagaaaccgcaacccattccaaattccgcctcacc
tacgaagaagcgcaggagattattgaaggcaaaaatcatcctgaactcagcggcccgatg
gaaatgctggtaaagctgaccgaccgcctgaccgagaaaagatttcaggagaacgccatt
gatttcgaatcgcctgagccgcgttttgtgctcgacaaaacgggtaagcctgttgatgtc
atcatcaaaaaaagattcaaagcacaccgcctgattgaagaatgcatgttgctggcaaac
cggaccgttgccgaacatgtagatcagctgcgccaaaaatccggcaaaaaaatcacgcag
gataccttccccttcttttaccggattcatgccgaacctgataccgagcggctgcagcag
gttgcggatcacgttcgacccgcgggcataaagttcgacgtccgcaagggcaaagtcgac
gctaagtccatcaacaacgtgctcgaacaggtgaaaggcaaaagcattgagtatacggtc
aatgatttattgctgcggtccatggccaaagcggagtattcaccaaaaaatatcggacat
ttcgggcttgggtttagtcattacgcccattttacgagtcctataagaagatatcctgat
gtgctcgtgcacaggttgctgaaaagttacacggccggtttgccgtcatacaattttaaa
aaccttctcacttacggcgaacactgcagcgagcgggaacgggccgcggtaacagccgag
cgcgattccatcaaattgaagcaggtcgagtatctctccacccggatcgggcaggaattc
gatggcgtggtaagcggcgtgaccgagcgcggtatttacgtgctcctcaaggatatttac
tgtgaaggcatggtcggcatgtcagacctcgatgatgacttctatatttatgacaaacgt
cgtcactgcctcaccggccgccgcaagggacgaacctatatgctcgggaatgagttaaag
gtacgtgtcgtaaataccaacctggaactacgtcaaattgattttgaactcgcataa
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