Cyclonatronum proteinivorum: CYPRO_2356
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Entry
CYPRO_2356 CDS
T05709
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
cprv
Cyclonatronum proteinivorum
Pathway
cprv02020
Two-component system
cprv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cprv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CYPRO_2356
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CYPRO_2356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cprv03021
]
CYPRO_2356
Transcription machinery [BR:
cprv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CYPRO_2356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Acyl-CoA_dh_C
CEP76_N
LacI
Motif
Other DBs
NCBI-ProteinID:
AXJ01598
UniProt:
A0A345UM96
LinkDB
All DBs
Position
3073823..3075367
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AA seq
514 aa
AA seq
DB search
MITQKQRQGQFQKQVQTQQQKLSPQQIQYIKMLQMSTQHIEQRIKEEMESNPALEDADSG
EDLYGPDDNSYDEPAMQDTDTDATATEAETDAPAVDDDLDVDWDAFHSDNSEGYSSSTTW
NPDAPDWMDIPAPYRETQLEKLEQQVLLLDLSEKENLIADQILGSIDDDGYFRRALSAVA
DSIAFQHGMPVHPDEVAGVLERIQRLDPPGIAARNLRECLSIQLQMLDPHTPGLQTAKEI
IGNHWEDFEKKHFEKIMRKMDVSDDVFREAYDCLRMLDPKPGSFETAAADAGNFIVPDFE
VYYEPAENDTEKGGFVIKLNRRNLPDLVVSKSYEQMIADMAKRKEKNKEQKEAQLFLRSK
IESARWFIEMLYQRQQTLLAVMQTIVNIQESFFKSGVNIKPMILKDVADVVSLDVSTISR
VVNGKYVQTPFGVYELRYFFNEGITTQSGEEVSNLEVKNILADIIENEPKANPLSDQKLT
DILKEKGFIVARRTVTKYREQLRIPTARLRKSVI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgattacccaaaaacagcgtcaggggcagtttcagaagcaggtacagacacagcagcaa
aagctttcgccccagcagattcagtacatcaaaatgctgcaaatgtccacgcagcatatc
gagcagcggatcaaagaagaaatggaatccaaccccgcgctcgaagatgcagattccggc
gaagacctgtacggcccggatgacaacagctatgatgagcccgcaatgcaggataccgat
accgatgccacagccacagaagctgaaaccgatgccccggctgtagatgatgatctggat
gtggactgggatgcctttcactccgacaattccgaaggctacagctcctccacaacctgg
aatccggacgccccggattggatggacattccggctccctaccgggaaacgcagctggaa
aagctggaacagcaggtgctgttgctcgatctctcagaaaaagaaaacctcatagccgat
cagatcctcggttccatagatgacgacggctattttcgcagagccctgagcgcggtagct
gacagcatcgcatttcagcacggcatgccggtacacccggatgaagtcgccggtgtgctt
gagcgcattcagcggcttgacccgcccggtattgctgcccgaaacttacgggaatgtctg
agcattcagctgcaaatgctcgatccgcacacgcctggtctgcagacggccaaagaaatt
atcggcaatcactgggaagatttcgagaaaaagcacttcgaaaaaattatgcgaaagatg
gatgtctcggatgatgttttccgcgaagcttacgattgcctgcgcatgcttgaccccaaa
cccggctcatttgaaaccgccgcagccgacgccggtaatttcatcgtacccgattttgaa
gtctattacgaaccggcagaaaatgataccgaaaaaggcggctttgtgataaagctcaac
cgtcgcaaccttcccgatctcgttgtttccaaaagttacgagcagatgattgcggatatg
gccaagcgaaaagagaaaaacaaggagcagaaggaagcgcagctttttttgcgaagtaag
attgagtctgcccgttggtttattgaaatgctttatcagcggcagcaaacgctactcgcg
gtcatgcagaccatagtgaacattcaggaaagctttttcaaaagtggtgtaaacatcaaa
ccgatgattctcaaggatgtagccgatgtggtgagccttgatgtttcaaccatatcccgg
gttgtaaacggcaaatatgtgcaaaccccgtttggggtgtacgaactccgctacttcttt
aatgaaggcatcaccacccaatcaggggaagaagtttccaacctcgaagtgaaaaacatt
ctggcggatatcattgaaaacgaacccaaagcaaatcctctgagcgatcagaagctcacc
gacatcctcaaagaaaaaggatttattgtcgcccggcgaacggtaaccaagtaccgcgag
cagctgcggattccgaccgcccggcttcggaaatcagttatttaa
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