Cyclonatronum proteinivorum: CYPRO_2864
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Entry
CYPRO_2864 CDS
T05709
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cprv
Cyclonatronum proteinivorum
Pathway
cprv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cprv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYPRO_2864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cprv03019
]
CYPRO_2864
03400 DNA repair and recombination proteins [BR:
cprv03400
]
CYPRO_2864
Enzymes [BR:
cprv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYPRO_2864
Messenger RNA biogenesis [BR:
cprv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CYPRO_2864
DNA repair and recombination proteins [BR:
cprv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CYPRO_2864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
HRDC
Helicase_C
RecQ_Zn_bind
HTH_IclR
ResIII
HTH_38
HTH_20
HTH_5
GerE
HTH_23
Helicase_Sgs1
LexA_DNA_bind
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AXJ02102
UniProt:
A0A345UNQ0
LinkDB
All DBs
Position
3707321..3709474
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AA seq
717 aa
AA seq
DB search
MTKAEKILKEYFGYESFRPNQKDAIESVLSGRDTFVLMPTGGGKSLCYQIPALLMPGLTI
VVSPLIALMKDQVDALRANGVGAAFINSSTAYNEQVETAMKIRRGEIRLLYVAPERFKSK
DAVFSDILTGNTISLFAVDEAHCISHWGHDFRPDYLELASLKKRYPDVPVIALTASADET
TRKDITEKLRLQDPQTLISSFNRSNIRYEVRQPSDAFGELLDFLKDYRSESGIIYTLKRS
STEELAEQLKAEGFNALPYHAGLPPEKRAKYQELFLRDEVPIMVATIAFGMGIDKSNVRF
VVHMNMPKNIESYYQETGRAGRDGLASTALLFLNYGDLNTLRFFATIEDNPQQTDIMMRK
LDMMLAFCEAKTCRREYLMRYFGEDHPSSCGNCDVCLNDYISYDYTIEGQKVLSAVARMG
QQYGAEMVAQLLKGSKSKKMQFWMRDLKTYGAGRDQPVSFWRDMINELTAAGFLQRVTGS
LPVYKLTAKSRALLKGEARFMVQKPRAVANISNQRTTAGELRHDRVLFQKLRQLRKSIAD
AESVAPFVVLSDASLQELAAYFPQNKEQLLNITGFGSKKTETYGQRFLDVIIPYCSENNI
RPRTIPPKKRGSYPRSKSKTAKSDTALQTLQLFRAGKSIPEIAEHRELKPSTIENHLAAF
VERGMLEADEIVEADKIQTIAEAVKQNDSGLMREIKDSLGEGYSYGEIKIVMAALQA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagaaaaaattctaaaagaatactttgggtatgaatccttcaggcccaat
caaaaagacgcgattgaatccgtgctcagcggcagggatacttttgtgctgatgccaacc
gggggcggcaagtccctttgctatcagattccggccctactcatgccagggctgaccatc
gtcgtttccccgcttattgcgctcatgaaagatcaggtcgacgccctgcgcgccaatggt
gtaggtgctgccttcatcaattcaagcaccgcgtacaatgagcaggttgaaaccgctatg
aagatccggcggggtgaaatccgcctactttatgtggcaccggagcgctttaaaagtaaa
gacgccgtttttagcgacatactcaccggcaacaccatcagcctgtttgcggttgatgaa
gcgcactgtatttcgcactggggacatgatttccgcccggactatctcgaactcgcttcc
ctgaaaaaaaggtatcccgatgttccggtcattgcactcaccgcgagtgctgatgaaaca
acccggaaagacatcaccgaaaagctcaggctgcaagacccgcaaacgctcatatcgagc
ttcaaccggagcaacatacgctatgaagtacggcagccttccgacgcttttggcgagctt
ctcgactttctgaaagattaccgctcggaatcaggtatcatctataccctgaaacgcagc
agcaccgaagaactggccgagcaactgaaggccgaaggcttcaacgcccttccctatcat
gccggcctgccgcctgagaagcgggcgaaatatcaggagctgtttctgcgcgatgaagtg
cccatcatggtggcaaccattgcatttggcatgggtatcgacaagtctaacgtgcgcttt
gtggtgcacatgaatatgcccaaaaacatcgaaagctattatcaggaaaccgggcgcgcg
gggcgggacggcctggcaagtaccgcgcttttgtttctcaattatggtgatctgaacacc
ctgcgcttcttcgcaaccatcgaagacaatccgcagcaaaccgacatcatgatgcgcaaa
ctggatatgatgctcgctttctgcgaagccaaaacatgccgacgcgaatatctgatgcgg
tacttcggggaagatcacccttcgtcctgcggtaattgtgatgtctgccttaatgattac
atcagctacgattacaccatagaaggacaaaaagtgctctcagcggtagcccgcatgggt
cagcagtacggcgcagaaatggtagcgcagttgctgaagggctccaaatccaaaaagatg
cagttttggatgcgtgacctgaaaacctacggggcaggccgcgatcagccggtttccttc
tggcgcgatatgattaacgagcttaccgcggccggctttctgcagcgcgtaacaggatcg
ctgccggtgtacaaactcaccgccaaaagccgcgcattgcttaaaggcgaagcgcggttc
atggttcagaaaccgcgtgctgtggcgaacatcagcaatcagcgaacaaccgcaggtgag
ctgcgacatgaccgtgtgctgtttcagaaactgcgccaattgcgcaagagcattgccgac
gcagagagtgttgccccctttgtcgtgctctcagatgcttcccttcaggaacttgccgcc
tattttccgcaaaacaaagaacagttgctcaacattaccggcttcggcagcaaaaaaacg
gagacctacggacagcgctttctcgatgtcatcatcccgtactgcagcgaaaataatatt
cgccccagaaccatcccgcccaaaaagcggggcagctatccgcgaagcaagtccaagacc
gccaaaagcgacaccgcgcttcaaaccctgcagctattccgtgccgggaaatccatcccg
gaaattgcagaacaccgcgagctgaagccttctaccattgaaaatcatctcgcagccttc
gtagaacgtggcatgctggaagctgatgaaatcgtagaagcggataaaattcaaaccata
gccgaagctgtcaaacaaaacgacagcggcctgatgcgcgaaatcaaagattcgctgggt
gaaggatacagctacggggaaatcaaaattgttatggcagcacttcaggcctga
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