Colwellia psychrerythraea: CPS_0003
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Entry
CPS_0003 CDS
T00258
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
cps
Colwellia psychrerythraea
Pathway
cps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPS_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_0003 (recF)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPS_0003 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
DUF2813
ABC_tran
RsgA_GTPase
AAA_27
ALN
Motif
Other DBs
NCBI-ProteinID:
AAZ26772
UniProt:
Q48AS5
LinkDB
All DBs
Position
2635..3768
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AA seq
377 aa
AA seq
DB search
MSVARLTTYNFRNLSSVAIDLHPKLNFFIGNNGSGKSSLLEALFFLGHGKSFRTSKVEHL
ACYETDNFVVSIKDVNDLQLGLSKNLQTGVTLIKINGERHARLSELAKNIAVQIVTPESF
KLFFGGPKERRRFIELGMFHVKHDSSKQWREFNRVLKQRNACIRHNLDKATFDYWTGLFC
QLSEQVAEVRSQYITNLISELPYWLEILLPNIADKVTVQYLQGWPQKKNLMDSLNDSHER
EQAFGYSIYGAHKFDVKFLIAKQALESQLSRGQQKLFLLALTFAQAKLIARVNRVKPILL
IDDIGAELDINSRESLSQALSILDCQVIITAIEEGVLQPFIDDVSVADKESSKKTKYHMF
HVKHGGILPVNNSVKIE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgctaggcttactacgtataactttagaaatttatcatctgttgctattgat
ttacatcccaagcttaatttttttattggcaataatggcagtggaaaaagtagtttactt
gaagcccttttttttctgggtcacggtaagtcatttcgaacgagtaaagtagagcatctt
gcttgttacgaaaccgataattttgttgtcagtattaaagatgttaacgatttacaactt
ggtttaagtaaaaatttacagaccggcgttacgctcattaaaattaatggtgagcgtcat
gcacgtttatctgaattggcaaaaaatattgctgtgcaaattgtcactcctgaaagtttt
aaattgttttttggaggaccgaaagagcgtcgacgttttatagagttaggtatgtttcac
gtgaaacatgattcatctaaacaatggcgtgaatttaacagagtcttaaaacagcgtaat
gcttgtatacgacataacttagataaagctacctttgattattggactggtttattttgt
caactatcagagcaggttgctgaagtaagatctcaatatattactaacttaatttcagaa
ttaccttattggttagaaattttgttaccaaatattgctgataaggtaactgtacaatat
ttacagggttggccacaaaaaaagaatttaatggattcgctgaacgatagccatgagaga
gaacaagcttttggttatagtatttatggcgcacataaatttgatgtgaaatttctcatt
gcaaagcaggcattagagagccagctttcaaggggacaacaaaagttgtttttactggca
ttaacatttgcacaggctaaattaattgcaagagttaatcgagtaaaaccaattttactt
attgatgatataggggcagaattagatattaattctagggaatccttatcacaagcgcta
agtattttggattgccaagttattatcacggcaatagaagaaggtgtattacaacctttt
attgatgacgtttcagttgctgataaagagagtagtaagaaaacaaaatatcatatgttt
cacgtgaaacatggtggtatattacctgtgaataattcagttaagattgagtag
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