Colwellia psychrerythraea: CPS_0011
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Entry
CPS_0011 CDS
T00258
Name
(GenBank) putative soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cps01011
]
CPS_0011
Enzymes [BR:
cps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CPS_0011
Peptidoglycan biosynthesis and degradation proteins [BR:
cps01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CPS_0011
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
AAZ25465
UniProt:
Q48AT7
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All DBs
Position
11977..13908
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AA seq
643 aa
AA seq
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MKSILKVILLSVCTLSSINILQANDSLQILTDVGQQRIFLKAEKLLVKSNSQQYQSLYNQ
LYYYPLQPYLDQRRLIENMQLSSAGEIATFLEKHQHSPLDWPLRKAWLMFLAKKNKGALF
LEFYQSTRNNVLTCHKLNFSLEAGLPSNVVLPQVTKLWLVGKSLDKVCDPIIEQWQQAGY
RTDEIVWQRIGLAADGGKHTLIPYLTNLLPKDQQYLGRLWHQVRRDPATVTRQYKFIKKS
TKESQIYTYGIKRLIWRDPDKALASFKKAQQIFTFSTTQHQQIVAKFAVALASKNHPQAR
IWLEKLDPLNIDSNIMQWQLTEVLKQQNWQLVLKELATMPEKYKAKLQWRYWYARALIAT
DDLEHGQDVMNELSSKRHYYGFLAASYLETPVSLQDSPLAITSQEKNAILLHPSAKRAFE
FYYLGRYVKARREWRYWLTQLNNREKLVAAKLANENGWFDRAIFTLSKVGYMDDVELRFP
KAFDKKINQHAKKQAINPAWAFAIARRESSFMTDARSPVGAKGLMQLMPNTAKQLKRGSV
SRQYLYNADNNIKLGTKYLRKLLDKNKGNQILATASYNAGPHRVKGWLKNSHAMPADIWI
ETIPFKETRNYVKSVLAYQEIYQHKPGQVSQIFEQVINMSIGD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagtattctaaaggttatattactgtctgtttgcacactttcgtcaattaatatt
ttgcaagcaaatgatagtttgcaaatattgacagatgttggacaacaaagaatattctta
aaagctgaaaaattattagtaaaaagtaattctcaacagtatcaaagcctctataatcag
ctgtattactaccctctacaaccgtatttagatcagcgccgtctaatagaaaacatgcag
ttatcttcagcaggggaaatagccactttcttagaaaaacatcaacattcgccattggat
tggccattacgaaaagcatggttaatgttcttagccaaaaagaataagggcgcacttttc
cttgagttttatcaaagtactcgtaataacgtacttacttgccacaaactcaacttttct
ttagaggcgggtctaccctcaaatgttgtattacctcaagtaacaaaactatggttagtc
ggtaaatcgttagataaagtttgtgacccaataattgaacaatggcaacaagcgggttat
agaaccgatgaaattgtatggcaacgtatagggttagcggcagatggcggaaaacatacc
ttaattccttatttaacaaacttactgccaaaggatcagcaatatttaggacgactgtgg
catcaagtaagacgtgatcctgcaaccgtaacgagacagtataagtttattaaaaaatcg
acaaaagaaagccaaatatatacttatggtatcaaacgcttaatctggcgtgatcctgat
aaagcattagccagttttaaaaaggcgcagcaaatattcactttttcaacaacacaacat
cagcaaatagtcgcaaaatttgccgtggctttagcaagtaaaaatcatccacaagctagg
atttggttagaaaagttagatccactgaacatagatagtaatattatgcagtggcagtta
actgaagttttaaagcaacaaaattggcaacttgtcttgaaagaactggcaacaatgcct
gaaaaatataaagcaaaattacagtggcggtactggtatgcaagagcattgattgcaacc
gatgatttagaacatggccaagatgtaatgaatgaattatcaagtaaacgtcattattat
ggttttttggctgctagctacctagaaacccccgtcagtttgcaagatagtccattagcg
atcactagccaggagaaaaacgctatattgttgcacccctcagctaagcgggcatttgaa
ttttattatttaggccgttatgtcaaagcgcgcagagagtggcgttattggcttacacaa
ctgaataatcgtgaaaaattagtcgctgcaaaactcgctaatgaaaatggttggtttgac
cgagcaatattcaccttgtcaaaagttggttatatggatgatgttgagttgagatttcca
aaagcatttgataagaagattaaccagcatgccaagaagcaagcaattaaccctgcgtgg
gcttttgctatcgccagacgtgaaagttcgtttatgacagatgctcgttcaccggttgga
gccaagggcttaatgcagcttatgccaaatacagcaaagcaattaaaacgcggtagtgtt
agtcgacagtatttgtacaatgcggataataatatcaaattaggaacaaagtacttacgt
aagcttctggataaaaacaaaggaaatcagattcttgctacagcttcttacaatgcagga
cctcatagagtaaaggggtggttaaagaatagccatgcgatgcctgcagatatttggata
gaaaccattccctttaaagagactcgtaattacgtaaaaagtgttttagcgtatcaagag
atttatcaacataaaccagggcaggttagtcagatttttgagcaagtcattaatatgagt
attggtgattaa
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