Colwellia psychrerythraea: CPS_0100
Help
Entry
CPS_0100 CDS
T00258
Name
(GenBank) transcriptional regulator, LysR family
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cps03000
]
CPS_0100
Transcription factors [BR:
cps03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CPS_0100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Fer4_24
Motif
Other DBs
NCBI-ProteinID:
AAZ28137
UniProt:
Q48AP5
LinkDB
All DBs
Position
107752..108672
Genome browser
AA seq
306 aa
AA seq
DB search
MNNIKNILPHRLGDSHIRILRIFKAVIESGGFAAAEAELNISRPAISNAMSELESLLNMR
LCHRGRTGFSITEQGEHVYNATLQLLGSLDTFKSQINAINTKLVGDLNIGITDNLVTNPQ
MRITRSLSTFKHRAPEVIFNIQMMPPYDIENAVLEGQLHIGVVPDLRALSGLNYLPLYKE
KSLLYCSAQHPLFNQDLNTISDYALEKYDAVLPCYPQPADIKQQQKRFKGSATSTDREGI
AFLILTGRFIGFLPTHFAERWVVQDLLRAIEPHKRNFYTNFSAITRKGARPNLITEAYLE
ELQKTA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaataatataaaaaacatcttacctcaccgacttggtgattctcatattcggatcttg
cgcatttttaaagccgttatcgaatctggagggtttgctgctgcagaggccgaacttaat
atcagtcgtcctgctattagtaacgcaatgtctgaattagaatcgctattgaacatgcgg
ctgtgccatcgcggtagaacgggattctctattaccgagcaaggcgaacatgtttataac
gcgaccttgcagctattaggcagcttagatactttcaagtcgcaaattaatgccatcaat
accaagctggttggagatctaaatataggtattaccgataatttggttactaacccacaa
atgcgtattaccagatcgcttagtactttcaaacatcgtgcacctgaagtcatctttaat
attcagatgatgccaccttacgacattgaaaatgcagtattagaaggacaactacatatt
ggcgtggtccccgatttacgtgcgttatctgggttaaactaccttcccttatacaaagaa
aagtccttattgtattgcagtgctcagcatccactattcaaccaagatctcaatacgatt
agtgattacgcccttgaaaaatatgacgcggtattaccctgctatcctcagccagctgac
attaaacaacaacaaaaaagatttaagggctcggcaacctctaccgatagagaaggcatt
gcatttctcattcttacggggcgttttataggttttttacccactcattttgccgaacgt
tgggtggtacaagatttgttgcgtgccattgaacctcacaaacgtaacttctacactaat
ttttcagctatcactcgaaagggcgctcgccccaatttaataactgaagcttatttagaa
gaattacaaaaaacagcctag
DBGET
integrated database retrieval system
