Colwellia psychrerythraea: CPS_0212
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Entry
CPS_0212 CDS
T00258
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPS_0212 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_0212 (mutM)
Enzymes [BR:
cps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CPS_0212 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPS_0212 (mutM)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPS_0212 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AAZ26060
UniProt:
Q48AD4
LinkDB
All DBs
Position
219444..220259
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AA seq
271 aa
AA seq
DB search
MPELPEVEVCRLGISPHVIAQEVSEVIIRNKRLRWPIPDEVCSAVGLPVLKVERRAKYLL
LRFSTGTLLLHLGMSGTIRVIEQDTPVAKHDHFDLVFKHGKSLRLNDPRRFGAVLWLAND
EDELGLLAKLGPEPLSDDFAEGYLFSKAKNRKVPIKTFLMNNHVVVGVGNIYANEALFQA
GILPTAKAKDIDEHRMNSLTAIIKKVLSAAIAQGGTTLKDFTQADGRPGYFAQSLMVYGR
AGEACVTCKTKLQEIRQSNRSSVFCPSCQQD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacccgaagtagaagtgtgccgcttaggtataagccctcatgttatagct
caggaggtcagtgaggtcattattcgtaataagcgcttacgatggcctattccagatgaa
gtctgttctgctgttggtttacctgtgctcaaggttgagcgacgtgcaaaatatctatta
ttgcgtttttcaacggggactttattattgcatttaggcatgtccggtaccattagagta
attgaacaagatactcctgtagcgaaacatgaccactttgatctagtttttaagcatggc
aaaagcttgcgactgaatgaccctcgccgttttggtgcagtgttatggctagctaatgat
gaagatgaactcggcttattagcgaaactcgggccagagccattaagtgatgactttgct
gaggggtatttgtttagtaaagcaaaaaatcgcaaagtacctatcaagacttttttaatg
aataaccatgtcgtggtaggagtcggtaatatctatgctaatgaagcactgtttcaagcg
gggattttaccgacagcgaaagcaaaagatattgatgaacaccggatgaacagtttaacg
gctattataaaaaaagtgttgagtgctgccattgcacagggcggcactacgcttaaggat
tttacccaagccgatggtcgacctggttattttgctcaatcacttatggtatatggccga
gcaggagaagcctgtgtgacttgcaaaacaaaattacaggaaattagacagtctaatcgt
agctctgttttttgtcctagctgtcaacaggattaa
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