Colwellia psychrerythraea: CPS_0250
Help
Entry
CPS_0250 CDS
T00258
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00730
Thiamine metabolism
cps01100
Metabolic pathways
cps01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CPS_0250 (thiC)
Enzymes [BR:
cps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CPS_0250 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AAZ28309
UniProt:
Q48A96
LinkDB
All DBs
Position
253519..255495
Genome browser
AA seq
658 aa
AA seq
DB search
MNNSTDAVNPAKKPQTRREKREAAEAFLKNVSDQSFPNSKKVYVQGEIHDIKVGMREITL
SDTLVSGSKDKPVYEKNEPLCVYDTSGFYTDENVEIDVHKGIPRLRETWIDARDDVETFT
STHSEFAQQRLDDEGVDEIRFEHLPKMRIAKKGKNVTQMHYARQGIITPEMEYIAIRENL
KREEVKDATLLLQHKGQSFGASIPEQITPEFVRDEVARGRAIIPVNINHPECEPMIIGRN
FLIKVNANIGNSAVTSSIEEEVEKLVWSTKWGADTVMDLSTGRNIHETREWIMRNSPVPI
GTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGI
VSRGGSIMAKWCLAHHKENFLYTHFEDICEILKQYDVSFSLGDGLRPGSVADANDEAQFA
ELHTLGELTKIAWKHDVQTIIEGPGHVPLHMIKENMEEQLEHCGEAPFYTLGPLTTDIAP
GYDHITSGIGAANIGWYGCAMLCYVTPKEHLGLPNKEDVKEGLMTYKIAAHAGDLAKGHP
GAQIRDNAMSKARFEFRWYDQFNIGLDPERARTYHDETLPQESGKVAHFCSMCGPKFCSM
KISQEVREYAANLDKNAIKIQLLDETITLTSDEAIERAMQEKSAEFKATGSEIYQLAE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactcaaccgacgctgttaatccagcgaaaaaaccacaaacacgacgtgaaaag
cgcgaagcggcagaagcatttttaaaaaatgtctcagaccaatcttttccaaattctaaa
aaagtctacgtgcaaggtgaaatccacgatatcaaagtcggtatgcgtgaaattacctta
tctgacaccttagttagcggtagtaaagacaagccagtctatgaaaaaaatgaaccatta
tgtgtttatgatacttcaggtttttataccgatgaaaacgttgaaatagacgttcacaaa
ggtattcctcgtttacgtgaaacttggattgatgcgcgtgatgatgtagagacttttact
tcaactcattctgagtttgcacagcaacgtcttgatgatgaaggtgttgatgaaattcgt
tttgaacatttacctaaaatgcgcattgctaaaaaaggtaaaaatgttacgcaaatgcat
tatgctcgccaaggcattattaccccagagatggaatatattgccattcgtgaaaactta
aaacgtgaagaagtaaaagatgcaacgctactgctacaacacaaaggtcaatcctttggt
gctagtattccagagcaaatcacgcctgaatttgtccgtgacgaagtagctcgtggtcgc
gctattattccagtaaacatcaaccatccagaatgtgagccaatgatcattggtcgtaac
tttttaattaaagtgaatgctaatatcgggaactcagcggttacctcttctattgaagaa
gaagttgaaaagctcgtttggtcaactaaatggggtgcagataccgtcatggatttatcg
acgggtcgtaatattcatgaaacccgtgaatggatcatgcgtaactcaccagtccctatt
ggtactgtccctatttaccaagcacttgaaaaagtaaatggtgtagctgaagatcttacc
tgggaaatattccgcgatactttaattgaacaagcagagcagggtgttgattactttacc
attcatgcgggtgtgttattgcggtatgtacctatgacggcaaaacgtgtcaccggtatt
gtttctcgcggtggttcaatcatggcgaaatggtgtttagcgcatcacaaagaaaatttt
ctttacacacactttgaagatatctgtgaaattttaaagcagtacgatgtgtcattttca
ttaggtgatggtttacgtccgggttcagtggcagatgcgaacgatgaggcacagtttgct
gaattacatacgttaggtgagttaactaaaattgcctggaagcatgatgtgcaaaccatt
attgaaggccctggtcacgtgccacttcatatgattaaagaaaatatggaagagcaactt
gagcattgtggcgaagcgcctttctatacgcttggcccattaactaccgatattgcgcca
ggttatgatcatattacttctggcataggtgcggctaatattggttggtacggttgtgcc
atgctttgttatgtaacaccgaaagagcatttaggtttaccgaataaagaagacgtaaag
gaaggcttgatgacctataaaattgccgcacatgcaggcgatttagctaaaggtcatcca
ggtgcacaaattcgtgataatgctatgtctaaagcacgctttgagttccgttggtacgat
caattcaatattggtttagatccagaacgagcacgcacttaccatgatgaaaccttgcca
caagagtccggtaaagttgcgcatttctgttctatgtgtggaccgaaattttgctcaatg
aaaatctcacaagaagtacgagagtacgctgctaatttagataaaaatgcgataaaaatt
cagctgcttgatgaaaccattaccttaacttctgatgaagcgattgaacgggcgatgcaa
gaaaaatctgctgaatttaaagcaaccggtagcgaaatctaccaacttgctgaatag
DBGET
integrated database retrieval system