Colwellia psychrerythraea: CPS_0780
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Entry
CPS_0780 CDS
T00258
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps03030
DNA replication
cps03430
Mismatch repair
cps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPS_0780
03430 Mismatch repair
CPS_0780
03440 Homologous recombination
CPS_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cps03032
]
CPS_0780
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_0780
Enzymes [BR:
cps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPS_0780
DNA replication proteins [BR:
cps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPS_0780
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPS_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAZ25594
UniProt:
Q488I5
LinkDB
All DBs
Position
799355..799966
Genome browser
AA seq
203 aa
AA seq
DB search
MNANSLIILDFETTGLSPDNGDRAIEIGAVKLENGVVTDRFQELMYPGRPVSHFIADYTG
ITNVMLSKAAPCHEVMDRFSGFIQGQNLVAHNASFDKRFLDSELKRISSGYDGQFACSLL
LSRRLYQTAPNHKLGTLINYKGIASNGSFHRALYDSEMTAKLWVAMLDDIQQQAGIDEVP
FSLIQKLTKTTKANVGKLLANYR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaactctctaataatcctcgattttgaaacaaccggtctgtcacctgataat
ggcgatagagccattgaaattggtgcggtaaaacttgaaaatggcgtggtaactgatcgt
tttcaagagttgatgtatcctgggcgaccggtaagtcactttattgctgattacactggc
atcactaatgtaatgctaagtaaagccgcgccatgtcatgaagtcatggatcgttttagc
ggttttattcaagggcaaaacctcgttgctcataatgcatcgtttgataagcgtttttta
gatagtgagctaaagcgtatctcgtcgggttatgatgggcagtttgcctgctcgttattg
ttatctcgtcgattatatcaaactgcacctaaccataagttaggtacattaattaactat
aaaggcattgcctcaaatggcagtttccatagagcattatacgattctgaaatgacagca
aagctttgggttgcgatgttagatgatattcagcaacaagctggtattgatgaagtgcca
ttttctttaattcagaagttaactaaaacgactaaagcgaatgttggtaagcttttagct
aactacagataa
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