Colwellia psychrerythraea: CPS_0851
Help
Entry
CPS_0851 CDS
T00258
Name
(GenBank) sigma 54-dependent transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cps03000
]
CPS_0851
Transcription factors [BR:
cps03000
]
Prokaryotic type
Helix-turn-helix
Other families
CPS_0851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
AAA_16
AAA
HTH_8
IstB_IS21
GAF_3
AAA_22
AAA_7
AAA_2
nSTAND6
AAA_14
MCM
Motif
Other DBs
NCBI-ProteinID:
AAZ28286
UniProt:
Q488B5
LinkDB
All DBs
Position
866544..868127
Genome browser
AA seq
527 aa
AA seq
DB search
MKKISSTAVIELALDLATSLNTKDRFDRLLDTVRKTITCDAVALLSYHGDVLKPIALQGL
SRDTLGRRFYVEEHPRFLALCQSKSPIRFAADSPLPDPYDGLLIDREGDLPVHSCMGLPL
YYDDKLLGLLTIDSLTPHDFEDIDVRMLEVISAIAAATLNTAFLLDQLESRADHSQRVVA
ELTEEAWKRDGGELIGESPIMSQLKQELDIVASSDFNILIYGETGVGKELVARTLHQKSL
RQHGPMVYVNCAALPENLIESELFGHVKGAFTGADRNRAGKFSLADGGTLFLDEIGELPF
GAQSKILRAIQSNEIQPVGQDNVEEVDVRIVAATNRDLKEEVGEGRFRADLYHRLSVYPI
RVPRLYERVGDVQLLAGYFVEQTRRKLGIAQLKITEQAVAHLTQYNWPGNVRELEHVVSR
ATLKARARQRDKAIISIDKIDCGTLNAVGAELPIELIAESGLSSIAEQQVNLNLKVETES
FQKQLISRILKEEEGNWAAAARRLSTDRANLNRIAKRLNIKVVKSII
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatatcatcaacggcagttattgagctagccctcgaccttgcgacgagttta
aacaccaaagatagatttgatcggttattagatactgttaggaaaacgatcacctgtgat
gcggtagcgttactttcttatcatggtgacgtgctcaaacctattgctttacaaggctta
agtagagataccttaggtcgccgtttttatgtcgaagaacatcctcgatttctagcactt
tgccaatcaaaatcacctattcgttttgcggctgactcaccgttacctgacccttatgac
gggctattgattgaccgtgagggggatttacctgtgcattcatgtatgggcttgccacta
tattatgatgataagctattgggtttattaacgattgatagccttacaccgcatgatttt
gaagacattgatgtgcgtatgttagaggttatttcagcgattgctgctgcaacactcaat
accgcttttctgctagatcaacttgaaagtagagcggatcattcacagcgcgtagtggca
gagttaacagaagaagcatggaaacgcgatggtggtgagcttattggcgaaagccctatt
atgtcgcaactcaagcaagagttagatattgtcgcttcttccgattttaacattttaatc
tatggtgaaaccggggtgggcaaagaactagttgcccgtactcttcatcaaaaatcactt
cgtcaacatggccctatggtttatgtcaattgtgccgcgctacctgaaaacttgattgaa
agtgagctgtttggacatgttaaaggggcttttactggcgcagatagaaatcgtgctggt
aaattttccttggctgatggtggtacattatttttagatgaaataggggagttgcccttt
ggtgcgcaaagtaaaatattaagggcaatacaaagcaatgagattcagccggttggccaa
gataatgttgaagaagtggatgttcgtattgtcgctgcgaccaatcgagatctcaaagaa
gaagtgggagaaggccgctttcgtgccgatttgtatcacagattaagtgtatacccgatt
agagtgcctaggctttatgagagagttggcgatgtacagttattagctggttactttgtt
gaacaaactcggcgaaagctaggtattgctcagttaaaaattactgagcaggcggttgct
catttaacacaatataactggcctggtaatgtgcgcgaactagagcatgtagtcagcagg
gctaccctaaaagcacgggcacgacagcgtgataaggcgataatatcaatcgataaaatc
gattgcggaacacttaacgcggttggcgcagagttgccgatagagcttatcgcagaaagt
ggactctcatcaattgctgaacagcaggttaacttgaatttaaaagtagaaacagagagt
tttcaaaaacaattaattagccgaattctcaaagaagaagagggtaattgggccgctgct
gcaaggcgactatctaccgatcgcgctaatttaaaccgtattgccaaacgtttgaatatt
aaagtggtgaagtccattatttaa
DBGET
integrated database retrieval system
